Non-Coding RNA Search

Ss1.1-rfbs3934b_j4.5

Sequence:


               
               AGCCAAGAGTTGGACTACTCCAGAAACTAGAGTTCTCTTTCTAGAATGCACAAAACAATG
GAGTGTCTGTGGGTCTACCAGAACTAAAGTGGCAGACTGGGAGTTGTTGATATTAGCTAA
CTTTGGACCACTGGCTGTAGAGCATCAAACTGAGGGAATGATCCGTGCTTCTAAATGATC
CACAGGTTTTGTGTCTTTTAAAAGTGCCATTCTAGAATATCCAAAGGAACCAAGAGTCTG
CGGCTCTGGATTGATCGGAGTCAAGGAAGCATGGACGGTTCTAGACGTCTGAGATTGGCT
GGTTCTGGTTTGCCCAGGGCCGTGGTGAATACGGATGAGGATGGATGACTTCTTGGTGGT
TCTGTAATGCCAAAAGGAATCGGGGCTCCAGGGATCCAGAGCTGTCCCTGATTAAAACCT
GGAAGTTCTAATCCACTTCTAGAACTTGAGCGGTTCTAGCAGGTGGATTCAGGATTTGAC
AGACCACGTTGCTAGGCTGACCTAGAAGGTGAGGACCCCAGAAACACCCTGTGGGGAACA
GGGCTAGTTACTGGCAAGGGAAGGGAGAGGCCTGAGGCTGGTGAATCTACAGTGCTCTGG
AATCTTCCACCTAGTGATATGTGTCTATTTCTTAAAGATGTTATACATATGTGTATTATG
TATATAAATAATATAAATAAAGATATCTATCTGACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCCAAGAGTTGGACTACTCCAGAAACTAGAGTTCTCTTTCTAGAATGCACAAAACAATG
GAGTGTCTGTGGGTCTACCAGAACTAAAGTGGCAGACTGGGAGTTGTTGATATTAGCTAA
CTTTGGACCACTGGCTGTAGAGCATCAAACTGAGGGAATGATCCGTGCTTCTAAATGATC
CACAGGTTTTGTGTCTTTTAAAAGTGCCATTCTAGAATATCCAAAGGAACCAAGAGTCTG
CGGCTCTGGATTGATCGGAGTCAAGGAAGCATGGACGGTTCTAGACGTCTGAGATTGGCT
GGTTCTGGTTTGCCCAGGGCCGTGGTGAATACGGATGAGGATGGATGACTTCTTGGTGGT
TCTGTAATGCCAAAAGGAATCGGGGCTCCAGGGATCCAGAGCTGTCCCTGATTAAAACCT
GGAAGTTCTAATCCACTTCTAGAACTTGAGCGGTTCTAGCAGGTGGATTCAGGATTTGAC
AGACCACGTTGCTAGGCTGACCTAGAAGGTGAGGACCCCAGAAACACCCTGTGGGGAACA
GGGCTAGTTACTGGCAAGGGAAGGGAGAGGCCTGAGGCTGGTGAATCTACAGTGCTCTGG
AATCTTCCACCTAGTGATATGTGTCTATTTCTTAAAGATGTTATACATATGTGTATTATG
TATATAAATAATATAAATAAAGATATCTATCTGACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-692, gnl|bosTau2|chr18 (50354756-50354074)
               

               
               6-692, gnl|Hg17|chr19 (53660502-53661149)
               

               
               6-692, gnl|Mm7|chr7 (41993356-41992699)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-692, gnl|bosTau2|chr18 (50354756-50354074)
               

               
               6-692, gnl|Hg17|chr19 (53660502-53661149)
               

               
               6-692, gnl|Mm7|chr7 (41993356-41992699)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fbs (0.175346)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)

	6-692, gnl\|bosTau2\|chr18 (50354756-50354074)
	6-692, gnl\|Hg17\|chr19 (53660502-53661149)
	6-692, gnl\|Mm7\|chr7 (41993356-41992699)