Ss1.1-rfbs3937b_g23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGCCGCTGGAAAAACAGAATGGCCGTTTGCCTAACGGTAATATTGACACTGAAAATAA CCACAGCACACCAGACCCAACGTGGGTTCATGAGATTTTTCAGGGAACATTGACTAATGA AACCAGATGTCTTACTTGCGAAACCATAAGCAGCAAAGATGAAGATTTTTTAGACCTTTC TGTTGACGTGGAACAAAACACATCAATTACTCACTGCTTACGGGGTTTTAGCAACACGGA AACTCTATGCAGTGAATACAAATATTACTGTGAAGAATGTCGCAGCAAACAGGAAGCACA CAAACGGATGAAAGTTAAAAAGCTGCCCATGATTCTGGCTCTACATCTGAAAAGGTTTAA GTATATGGATCAACTTCATCGATACACAAAACTTTCTTTTATCTGTTTGAGTTGCTCTGC TTTATAGAACATGAAATTTGGGGCACGGAGGGATGATATTAATAAACGTCGAATAAGATT AACTTCTCTTTCTCTCTGTTTTAGTGGTCCCAATCGAGGCCATTATATTGCAATAGTTAA GAGTCACGATTTTTGGTTGTTGTTTGATGACGACATTGTAGAAAAAATAGATGCACAAGC TATTGAAGAATTCTACGGGTTGACATCCGATATCTCCAAGAACTCGGAGTCTGGCTACAT CCTTTTCTACCAGTCTCGGGACTGAGGGAAGCGTCACGGAGACTTTCTGCCTCATGTCTT CTCTGGTCGTTTGGGCAAGGATCAAGCACGGATGTTCCCAAGACGAGAGAAGCGAATGCA GGGAGCTCTGGGGGCAGTGGCGCCCTTTGCACACAATAAAGCAAAGACCGTGGATGGACA TGCTCTTCCCGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGCCGCTGGAAAAACAGAATGGCCGTTTGCCTAACGGTAATATTGACACTGAAAATAA CCACAGCACACCAGACCCAACGTGGGTTCATGAGATTTTTCAGGGAACATTGACTAATGA AACCAGATGTCTTACTTGCGAAACCATAAGCAGCAAAGATGAAGATTTTTTAGACCTTTC TGTTGACGTGGAACAAAACACATCAATTACTCACTGCTTACGGGGTTTTAGCAACACGGA AACTCTATGCAGTGAATACAAATATTACTGTGAAGAATGTCGCAGCAAACAGGAAGCACA CAAACGGATGAAAGTTAAAAAGCTGCCCATGATTCTGGCTCTACATCTGAAAAGGTTTAA GTATATGGATCAACTTCATCGATACACAAAACTTTCTTTTATCTGTTTGAGTTGCTCTGC TTTATAGAACATGAAATTTGGGGCACGGAGGGATGATATTAATAAACGTCGAATAAGATT AACTTCTCTTTCTCTCTGTTTTAGTGGTCCCAATCGAGGCCATTATATTGCAATAGTTAA GAGTCACGATTTTTGGTTGTTGTTTGATGACGACATTGTAGAAAAAATAGATGCACAAGC TATTGAAGAATTCTACGGGTTGACATCCGATATCTCCAAGAACTCGGAGTCTGGCTACAT CCTTTTCTACCAGTCTCGGGACTGAGGGAAGCGTCACGGAGACTTTCTGCCTCATGTCTT CTCTGGTCGTTTGGGCAAGGATCAAGCACGGATGTTCCCAAGACGAGAGAAGCGAATGCA GGGAGCTCTGGGGGCAGTGGCGCCCTTTGCACACAATAAAGCAAAGACCGTGGATGGACA TGCTCTTCCCGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 95 entry(ies) | More info |
| Aligned organism(s): 95 entry(ies) | Help | Less info |
| 7-150, gnl|bosTau2|chr12 (18308555-18308695) | |
| 7-150, gnl|canFam2|chr25 (15442461-15442634) | |
| 7-150, gnl|canFam2|chr25 (15442639-15442460) | |
| 7-150, gnl|canFam2|chr25 (15442646-15442385) | |
| 7-150, gnl|canFam2|chr25 (15442461-15442634) | |
| 7-150, gnl|canFam2|chr25 (15442641-15442545) | |
| 7-150, gnl|canFam2|chr25 (15442467-15442634) | |
| 7-150, gnl|danRer3|chr24 (18776325-18776149) | |
| 7-150, gnl|danRer3|chr24 (18776144-18776326) | |
| 7-150, gnl|danRer3|chr24 (18776137-18776404) | |
| 7-150, gnl|danRer3|chr24 (18776325-18776149) | |
| 7-150, gnl|danRer3|chr24 (18776319-18776146) | |
| 7-150, gnl|dasNov1|scaffold_2941 (51630-51459) | |
| 7-150, gnl|dasNov1|scaffold_2941 (51454-51631) | |
| 7-150, gnl|dasNov1|scaffold_2941 (51459-51687) | |
| 7-150, gnl|dasNov1|scaffold_2941 (51630-51459) | |
| 7-150, gnl|dasNov1|scaffold_2941 (51624-51456) | |
| 7-150, gnl|dasNov1|scaffold_34863 (8575-8684) | |
| 7-150, gnl|echTel1|scaffold_44261 (2569-2742) | |
| 7-150, gnl|echTel1|scaffold_44261 (2747-2568) | |
| 7-150, gnl|echTel1|scaffold_44261 (2754-2489) | |
| 7-150, gnl|echTel1|scaffold_44261 (2569-2742) | |
| 7-150, gnl|echTel1|scaffold_44261 (2575-2742) | |
| 7-150, gnl|fr1|chrUn (57927545-57927724) | |
| 7-150, gnl|fr1|chrUn (57927729-57927544) | |
| 7-150, gnl|fr1|chrUn (57927738-57927470) | |
| 7-150, gnl|fr1|chrUn (57927545-57927724) | |
| 7-150, gnl|fr1|chrUn (57927551-57927724) | |
| 7-150, gnl|galGal2|chr1 (168369331-168369501) | |
| 7-150, gnl|galGal2|chr1 (168369506-168369330) | |
| 7-150, gnl|galGal2|chr1 (168369511-168369250) | |
| 7-150, gnl|galGal2|chr1 (168369331-168369501) | |
| 7-150, gnl|galGal2|chr1 (168369337-168369501) | |
| 7-150, gnl|hg17|chr13 (26567727-26567991) | |
| 7-150, gnl|Hg17|chr13 (26567876-26567733) | |
| 7-150, gnl|hg17|chr2 (148887389-148887568) | |
| 7-150, gnl|hg17|chr5 (170611827-170611997) | |
| 7-150, gnl|hg17|chr9 (40334301-40334408) | |
| 7-150, gnl|hg17|chrX (89174192-89174365) | |
| 7-150, gnl|hg17|chrY (3594561-3594734) | |
| 7-150, gnl|loxAfr1|scaffold_7430 (40340-40510) | |
| 7-150, gnl|loxAfr1|scaffold_7430 (40515-40339) | |
| 7-150, gnl|loxAfr1|scaffold_7430 (40522-40261) | |
| 7-150, gnl|loxAfr1|scaffold_7430 (40340-40510) | |
| 7-150, gnl|loxAfr1|scaffold_7430 (40511-40426) | |
| 7-150, gnl|loxAfr1|scaffold_7430 (40346-40510) | |
| 7-150, gnl|mm7|chr5 (145648764-145649022) | |
| 7-150, gnl|Mm7|chr5 (145648912-145648769) | |
| 7-150, gnl|mm7|chr7 (23144094-23144267) | |
| 7-150, gnl|mm7|chr7 (23144272-23144094) | |
| 7-150, gnl|mm7|chr7 (23144094-23144267) | |
| 7-150, gnl|mm7|chr7 (23144274-23144179) | |
| 7-150, gnl|mm7|chr7 (23144100-23144270) | |
| 7-150, gnl|monDom2|scaffold_15 (35977219-35977046) | |
| 7-150, gnl|monDom2|scaffold_15 (35977034-35977276) | |
| 7-150, gnl|monDom2|scaffold_15 (35977219-35977046) | |
| 7-150, gnl|monDom2|scaffold_15 (35977213-35977046) | |
| 7-150, gnl|monDom2|scaffold_31 (25185702-25185881) | |
| 7-150, gnl|monDom2|scaffold_31 (25185700-25185808) | |
| 7-150, gnl|oryCun1|scaffold_164362 (9148-9318) | |
| 7-150, gnl|oryCun1|scaffold_164362 (9319-9147) | |
| 7-150, gnl|oryCun1|scaffold_164362 (9148-9318) | |
| 7-150, gnl|oryCun1|scaffold_164362 (9319-9232) | |
| 7-150, gnl|oryCun1|scaffold_164362 (9154-9318) | |
| 7-150, gnl|oryCun1|scaffold_184507 (81229-80965) | |
| 7-150, gnl|panTro1|chr11 (40547562-40547671) | |
| 7-150, gnl|panTro1|chr13_random (14303793-14303972) | |
| 7-150, gnl|panTro1|chr14 (25747586-25747850) | |
| 7-150, gnl|panTro1|chrX (91923498-91923671) | |
| 7-150, gnl|panTro1|chrX (91923498-91923671) | |
| 7-150, gnl|panTro1|chrX (91923504-91923674) | |
| 7-150, gnl|rheMac2|chr12 (11856966-11857144) | |
| 7-150, gnl|rheMac2|chr15 (109390298-109390405) | |
| 7-150, gnl|rheMac2|chr17 (6855680-6855944) | |
| 7-150, gnl|rheMac2|chr6 (167636392-167636561) | |
| 7-150, gnl|rheMac2|chrX (88800650-88800823) | |
| 7-150, gnl|rheMac2|chrX (88800650-88800823) | |
| 7-150, gnl|rn3|chr12 (8828479-8828220) | |
| 7-150, gnl|rn3|chr7 (4292967-4293140) | |
| 7-150, gnl|rn3|chr7 (4293145-4292966) | |
| 7-150, gnl|rn3|chr7 (4292967-4293140) | |
| 7-150, gnl|rn3|chr7 (4293147-4293052) | |
| 7-150, gnl|rn3|chr7 (4292973-4293143) | |
| 7-150, gnl|tetNig1|chr6 (2836328-2836507) | |
| 7-150, gnl|tetNig1|chr6 (2836512-2836327) | |
| 7-150, gnl|tetNig1|chr6 (2836512-2836269) | |
| 7-150, gnl|tetNig1|chr6 (2836328-2836506) | |
| 7-150, gnl|tetNig1|chr6 (2836334-2836510) | |
| 7-150, gnl|xenTro1|scaffold_449 (203529-203356) | |
| 7-150, gnl|xenTro1|scaffold_449 (203351-203530) | |
| 7-150, gnl|xenTro1|scaffold_449 (203347-203600) | |
| 7-150, gnl|xenTro1|scaffold_449 (203529-203356) | |
| 7-150, gnl|xenTro1|scaffold_449 (203523-203356) | |
| 397-583, gnl|bosTau2|chr12 (18316664-18316849) | |
| 397-583, gnl|Hg17|chr13 (26543411-26543208) |
| Aligned organism(s): 95 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 7-150, gnl|bosTau2|chr12 (18308555-18308695) | |
| 7-150, gnl|canFam2|chr25 (15442461-15442634) | |
| 7-150, gnl|canFam2|chr25 (15442639-15442460) | |
| 7-150, gnl|canFam2|chr25 (15442646-15442385) | |
| 7-150, gnl|canFam2|chr25 (15442461-15442634) | |
| 7-150, gnl|canFam2|chr25 (15442641-15442545) | |
| 7-150, gnl|canFam2|chr25 (15442467-15442634) | |
| 7-150, gnl|danRer3|chr24 (18776325-18776149) | |
| 7-150, gnl|danRer3|chr24 (18776144-18776326) | |
| 7-150, gnl|danRer3|chr24 (18776137-18776404) | |
| 7-150, gnl|danRer3|chr24 (18776325-18776149) | |
| 7-150, gnl|danRer3|chr24 (18776319-18776146) | |
| 7-150, gnl|dasNov1|scaffold_2941 (51630-51459) | |
| 7-150, gnl|dasNov1|scaffold_2941 (51454-51631) | |
| 7-150, gnl|dasNov1|scaffold_2941 (51459-51687) | |
| 7-150, gnl|dasNov1|scaffold_2941 (51630-51459) | |
| 7-150, gnl|dasNov1|scaffold_2941 (51624-51456) | |
| 7-150, gnl|dasNov1|scaffold_34863 (8575-8684) | |
| 7-150, gnl|echTel1|scaffold_44261 (2569-2742) | |
| 7-150, gnl|echTel1|scaffold_44261 (2747-2568) | |
| 7-150, gnl|echTel1|scaffold_44261 (2754-2489) | |
| 7-150, gnl|echTel1|scaffold_44261 (2569-2742) | |
| 7-150, gnl|echTel1|scaffold_44261 (2575-2742) | |
| 7-150, gnl|fr1|chrUn (57927545-57927724) | |
| 7-150, gnl|fr1|chrUn (57927729-57927544) | |
| 7-150, gnl|fr1|chrUn (57927738-57927470) | |
| 7-150, gnl|fr1|chrUn (57927545-57927724) | |
| 7-150, gnl|fr1|chrUn (57927551-57927724) | |
| 7-150, gnl|galGal2|chr1 (168369331-168369501) | |
| 7-150, gnl|galGal2|chr1 (168369506-168369330) | |
| 7-150, gnl|galGal2|chr1 (168369511-168369250) | |
| 7-150, gnl|galGal2|chr1 (168369331-168369501) | |
| 7-150, gnl|galGal2|chr1 (168369337-168369501) | |
| 7-150, gnl|hg17|chr13 (26567727-26567991) | |
| 7-150, gnl|Hg17|chr13 (26567876-26567733) | |
| 7-150, gnl|hg17|chr2 (148887389-148887568) | |
| 7-150, gnl|hg17|chr5 (170611827-170611997) | |
| 7-150, gnl|hg17|chr9 (40334301-40334408) | |
| 7-150, gnl|hg17|chrX (89174192-89174365) | |
| 7-150, gnl|hg17|chrY (3594561-3594734) | |
| 7-150, gnl|loxAfr1|scaffold_7430 (40340-40510) | |
| 7-150, gnl|loxAfr1|scaffold_7430 (40515-40339) | |
| 7-150, gnl|loxAfr1|scaffold_7430 (40522-40261) | |
| 7-150, gnl|loxAfr1|scaffold_7430 (40340-40510) | |
| 7-150, gnl|loxAfr1|scaffold_7430 (40511-40426) | |
| 7-150, gnl|loxAfr1|scaffold_7430 (40346-40510) | |
| 7-150, gnl|mm7|chr5 (145648764-145649022) | |
| 7-150, gnl|Mm7|chr5 (145648912-145648769) | |
| 7-150, gnl|mm7|chr7 (23144094-23144267) | |
| 7-150, gnl|mm7|chr7 (23144272-23144094) | |
| 7-150, gnl|mm7|chr7 (23144094-23144267) | |
| 7-150, gnl|mm7|chr7 (23144274-23144179) | |
| 7-150, gnl|mm7|chr7 (23144100-23144270) | |
| 7-150, gnl|monDom2|scaffold_15 (35977219-35977046) | |
| 7-150, gnl|monDom2|scaffold_15 (35977034-35977276) | |
| 7-150, gnl|monDom2|scaffold_15 (35977219-35977046) | |
| 7-150, gnl|monDom2|scaffold_15 (35977213-35977046) | |
| 7-150, gnl|monDom2|scaffold_31 (25185702-25185881) | |
| 7-150, gnl|monDom2|scaffold_31 (25185700-25185808) | |
| 7-150, gnl|oryCun1|scaffold_164362 (9148-9318) | |
| 7-150, gnl|oryCun1|scaffold_164362 (9319-9147) | |
| 7-150, gnl|oryCun1|scaffold_164362 (9148-9318) | |
| 7-150, gnl|oryCun1|scaffold_164362 (9319-9232) | |
| 7-150, gnl|oryCun1|scaffold_164362 (9154-9318) | |
| 7-150, gnl|oryCun1|scaffold_184507 (81229-80965) | |
| 7-150, gnl|panTro1|chr11 (40547562-40547671) | |
| 7-150, gnl|panTro1|chr13_random (14303793-14303972) | |
| 7-150, gnl|panTro1|chr14 (25747586-25747850) | |
| 7-150, gnl|panTro1|chrX (91923498-91923671) | |
| 7-150, gnl|panTro1|chrX (91923498-91923671) | |
| 7-150, gnl|panTro1|chrX (91923504-91923674) | |
| 7-150, gnl|rheMac2|chr12 (11856966-11857144) | |
| 7-150, gnl|rheMac2|chr15 (109390298-109390405) | |
| 7-150, gnl|rheMac2|chr17 (6855680-6855944) | |
| 7-150, gnl|rheMac2|chr6 (167636392-167636561) | |
| 7-150, gnl|rheMac2|chrX (88800650-88800823) | |
| 7-150, gnl|rheMac2|chrX (88800650-88800823) | |
| 7-150, gnl|rn3|chr12 (8828479-8828220) | |
| 7-150, gnl|rn3|chr7 (4292967-4293140) | |
| 7-150, gnl|rn3|chr7 (4293145-4292966) | |
| 7-150, gnl|rn3|chr7 (4292967-4293140) | |
| 7-150, gnl|rn3|chr7 (4293147-4293052) | |
| 7-150, gnl|rn3|chr7 (4292973-4293143) | |
| 7-150, gnl|tetNig1|chr6 (2836328-2836507) | |
| 7-150, gnl|tetNig1|chr6 (2836512-2836327) | |
| 7-150, gnl|tetNig1|chr6 (2836512-2836269) | |
| 7-150, gnl|tetNig1|chr6 (2836328-2836506) | |
| 7-150, gnl|tetNig1|chr6 (2836334-2836510) | |
| 7-150, gnl|xenTro1|scaffold_449 (203529-203356) | |
| 7-150, gnl|xenTro1|scaffold_449 (203351-203530) | |
| 7-150, gnl|xenTro1|scaffold_449 (203347-203600) | |
| 7-150, gnl|xenTro1|scaffold_449 (203529-203356) | |
| 7-150, gnl|xenTro1|scaffold_449 (203523-203356) | |
| 397-583, gnl|bosTau2|chr12 (18316664-18316849) | |
| 397-583, gnl|Hg17|chr13 (26543411-26543208) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fbs (0.175346) | |
| cty (0.10408) |