Non-Coding RNA Search

Ss1.1-rfcc04b_n23.5

Sequence:


               
               AAAAGTTGAACAACTTGTTATCTTTGAGTTGCTTTTTTTTTGCTACCCTCCCCCTTTATT
GAACGTTTTTGATATATTTATGAAAACTTCTTTCTTAGAAATTATGTTTAATAATGCAAT
GCAAGTAAGAATTGCATCTAGTTTTATTAACATGGTTAGCAATGCTTCATTGTATAGTAT
GATATGTAATTGCTGTATTATTGAGTAGGCTGTAATCCCCATATTAAATTTACTGTATTG
AAAACCAACTGCAGTACTAAATGTAACCTCTTGAATCGAAGCTTGTTAATGGGTCTTACT
TATTCAATAAAAATGACCAGAAAATGGAAACAACTAAAAAACATATCCTTTGATTATTAC
TGTACATTAGCATATTAAAATTTATAGCTTTAAGAGGTATTTGAATTCCAAAGATAAGAC
TTATAGGTTTAAAATAGCTCCTTGAGAACCAAAACTCATACACTTCCTTCAGAGCTCATA
TCTTCTAATGCACATACTTGTGTAATGGTGCAATAAATAGTTGTGTAATAATTTATAACA
TTATGTAATAATTTCCCTGGCTGCTTTTTAGTCTCTGTATATTTTGCATAACTGAGGTTT
TATCTTAAGTGATAGCTCAATAAGAATTGTATTACTATAGAGGCCTTCTCTCTTAATTTA
CTAGAAAAGGGGAAATTCATCTTCAGAGGAACAAATTCACAGTTCTAATTGTAGCATTAA
TTGTCTGGAACTGAAATAGAGTTTTAGAAGTGTACATTCGAAACGCACTTAAATTCAGTT
TTTTTTTCCTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAGTTGAACAACTTGTTATCTTTGAGTTGCTTTTTTTTTGCTACCCTCCCCCTTTATT
GAACGTTTTTGATATATTTATGAAAACTTCTTTCTTAGAAATTATGTTTAATAATGCAAT
GCAAGTAAGAATTGCATCTAGTTTTATTAACATGGTTAGCAATGCTTCATTGTATAGTAT
GATATGTAATTGCTGTATTATTGAGTAGGCTGTAATCCCCATATTAAATTTACTGTATTG
AAAACCAACTGCAGTACTAAATGTAACCTCTTGAATCGAAGCTTGTTAATGGGTCTTACT
TATTCAATAAAAATGACCAGAAAATGGAAACAACTAAAAAACATATCCTTTGATTATTAC
TGTACATTAGCATATTAAAATTTATAGCTTTAAGAGGTATTTGAATTCCAAAGATAAGAC
TTATAGGTTTAAAATAGCTCCTTGAGAACCAAAACTCATACACTTCCTTCAGAGCTCATA
TCTTCTAATGCACATACTTGTGTAATGGTGCAATAAATAGTTGTGTAATAATTTATAACA
TTATGTAATAATTTCCCTGGCTGCTTTTTAGTCTCTGTATATTTTGCATAACTGAGGTTT
TATCTTAAGTGATAGCTCAATAAGAATTGTATTACTATAGAGGCCTTCTCTCTTAATTTA
CTAGAAAAGGGGAAATTCATCTTCAGAGGAACAAATTCACAGTTCTAATTGTAGCATTAA
TTGTCTGGAACTGAAATAGAGTTTTAGAAGTGTACATTCGAAACGCACTTAAATTCAGTT
TTTTTTTCCTGA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               237-569, gnl|bosTau2|chr9 (12759364-12759027)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               237-569, gnl|bosTau2|chr9 (12759364-12759027)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fcc (0.197785)
               

               
               bfe (0.149858)
               

               
               lin (0.145603)
               

               
               nbm (0.0993246)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               bfe (0.149858)
               

               
               lin (0.145603)
               

               
               nbm (0.0993246)