Non-Coding RNA Search

Ss1.1-rfcc07b_m14.5

Sequence:


               
               CTGCGACGTGGACGTGTCCTTCATGTACCTGACCTTCTTCCTGGAGGATGACGACAGGCT
CGAGCAGATCAGGAAGGATTACAGCAGCGGGGCCATGCTCACGGGCGAGCTCAAGAAGGT
GCTCATAGAGGTGCTACAGCCCCTGATCGCCGAGCACCAGGCCCGGCGCAAGGAGGTCAC
GGACGAGGTGGTGAAAGAGTTCATGACTCCCCGGAAGCTGTCCTACGACTTCGAGTAACC
CTCTTTTATGCACACGGTCTAAGAGACGTAATTTACCAATAATCCCAGCCTAGTCGAATC
ACCGCTACCCCCAGACTCTGCCACACGGTAATTACTGGCTGGGCGTCTGCAAGCCCTGTG
AGTGGATCGGGGCTGTCCTTCTGTCTCCTGTGAGTGCGACCCCGTGGGGCACCTGGGTGC
CGGCTAACACCCCGTGGTCACACCGATCAGTCCAGCTGGAGTCTCTCCCACAAAAGCGGC
CCCCAGGGCGTGGGGCAGGGTGTCGGCTGGGCAGCCCGTGCTGGGCCGCCGGACTCCTCC
CACACGCAGACGCGCTCCTCCACCTGCTCTGTGAAAGAATGTGTAGTCTGGGTATGTCTA
TCTGGCATCAAATATGATCCTAAAACTAAAAAGTGCTTTGAAAAGTTGATGGGATAGTTG
AATGGGTGTAAGATGCATTTTAGCCCATGTCCCCCCCCAAAAAATTTTAAAAGAATTACT
GGCTAAAAGCTTTGCTCTGCAGGTGACGAGATCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCGACGTGGACGTGTCCTTCATGTACCTGACCTTCTTCCTGGAGGATGACGACAGGCT
CGAGCAGATCAGGAAGGATTACAGCAGCGGGGCCATGCTCACGGGCGAGCTCAAGAAGGT
GCTCATAGAGGTGCTACAGCCCCTGATCGCCGAGCACCAGGCCCGGCGCAAGGAGGTCAC
GGACGAGGTGGTGAAAGAGTTCATGACTCCCCGGAAGCTGTCCTACGACTTCGAGTAACC
CTCTTTTATGCACACGGTCTAAGAGACGTAATTTACCAATAATCCCAGCCTAGTCGAATC
ACCGCTACCCCCAGACTCTGCCACACGGTAATTACTGGCTGGGCGTCTGCAAGCCCTGTG
AGTGGATCGGGGCTGTCCTTCTGTCTCCTGTGAGTGCGACCCCGTGGGGCACCTGGGTGC
CGGCTAACACCCCGTGGTCACACCGATCAGTCCAGCTGGAGTCTCTCCCACAAAAGCGGC
CCCCAGGGCGTGGGGCAGGGTGTCGGCTGGGCAGCCCGTGCTGGGCCGCCGGACTCCTCC
CACACGCAGACGCGCTCCTCCACCTGCTCTGTGAAAGAATGTGTAGTCTGGGTATGTCTA
TCTGGCATCAAATATGATCCTAAAACTAAAAAGTGCTTTGAAAAGTTGATGGGATAGTTG
AATGGGTGTAAGATGCATTTTAGCCCATGTCCCCCCCCAAAAAATTTTAAAAGAATTACT
GGCTAAAAGCTTTGCTCTGCAGGTGACGAGATCTCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q6Z5Q1_ORYSA

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6Z5Q1_ORYSA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               75-736, gnl|bosTau2|chr21 (44990421-44989730)
               

               
               75-736, gnl|Hg17|chr14 (99871128-99870434)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               75-736, gnl|bosTau2|chr21 (44990421-44989730)
               

               
               75-736, gnl|Hg17|chr14 (99871128-99870434)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               lnt (0.142308)

	75-736, gnl\|bosTau2\|chr21 (44990421-44989730)
	75-736, gnl\|Hg17\|chr14 (99871128-99870434)