Non-Coding RNA Search

Ss1.1-rfcc14b_l15.5

Sequence:


               
               TTATGTGTATGGACATACAGCTGGTTGAGGCATTGTGTGGCTTCCAAAAGCCGATATCTA
CTCTTGACAACCGAACCATAGTCATCACTTCTCATCCAGGTATGGTAACTAGATAAGCTT
GTCTTTCTATTCTAGTGTTTTCATAGTCTGCTGGTAACTATATAGGCATGGAGAAAAGCT
GCTGAGTACATAGGCATCCTTGAGCTGAAATCATGCATTCTTGGCTGTCTTGGAAGCCCC
TAGAAGATCCAAAAACAAAAGGTATCAGGATTGTTTCCCATAAATTTACTTGTCAGTGAG
CTAGGACATTTCTGTTTATTTTCTCTGCGTCATAAAAGTGTGACTAGGAGCATGACTATG
CTGCAAGCAGGATCAGTGGTGTCTCTGTGCCGGATGCACAGGTCACAACTGTGGCTTGGA
GCTGATCCCTGGCCTGGTAAACTCCGTATGTATCAGGGCAGCCCAAAAAAAGTGTGACTA
TATTTGAGGTATTTGGTTTCATTGTTTTTAGGTCAGATTGTCAAGCATGGAGATATCAAG
TGTGTGCTAAATGAAGGCATGCCAATTTATCGTAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATGTGTATGGACATACAGCTGGTTGAGGCATTGTGTGGCTTCCAAAAGCCGATATCTA
CTCTTGACAACCGAACCATAGTCATCACTTCTCATCCAGGTATGGTAACTAGATAAGCTT
GTCTTTCTATTCTAGTGTTTTCATAGTCTGCTGGTAACTATATAGGCATGGAGAAAAGCT
GCTGAGTACATAGGCATCCTTGAGCTGAAATCATGCATTCTTGGCTGTCTTGGAAGCCCC
TAGAAGATCCAAAAACAAAAGGTATCAGGATTGTTTCCCATAAATTTACTTGTCAGTGAG
CTAGGACATTTCTGTTTATTTTCTCTGCGTCATAAAAGTGTGACTAGGAGCATGACTATG
CTGCAAGCAGGATCAGTGGTGTCTCTGTGCCGGATGCACAGGTCACAACTGTGGCTTGGA
GCTGATCCCTGGCCTGGTAAACTCCGTATGTATCAGGGCAGCCCAAAAAAAGTGTGACTA
TATTTGAGGTATTTGGTTTCATTGTTTTTAGGTCAGATTGTCAAGCATGGAGATATCAAG
TGTGTGCTAAATGAAGGCATGCCAATTTATCGTAGA

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               3-343, gnl|bosTau2|chr5 (33762377-33762018)
               

               
               3-343, gnl|Hg17|chr9 (33026591-33026975)
               

               
               3-343, gnl|Mm7|chr4 (40870166-40870505)
               


               
               461-575, gnl|bosTau2|chr5 (33762034-33761920)
               

               
               461-575, gnl|Hg17|chr9 (33026959-33027076)
               

               
               461-575, gnl|Mm7|chr4 (40870489-40870602)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-343, gnl|bosTau2|chr5 (33762377-33762018)
               

               
               3-343, gnl|Hg17|chr9 (33026591-33026975)
               

               
               3-343, gnl|Mm7|chr4 (40870166-40870505)
               


               
               461-575, gnl|bosTau2|chr5 (33762034-33761920)
               

               
               461-575, gnl|Hg17|chr9 (33026959-33027076)
               

               
               461-575, gnl|Mm7|chr4 (40870489-40870602)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fcc (0.197785)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)

	3-343, gnl\|bosTau2\|chr5 (33762377-33762018)
	3-343, gnl\|Hg17\|chr9 (33026591-33026975)
	3-343, gnl\|Mm7\|chr4 (40870166-40870505)

	461-575, gnl\|bosTau2\|chr5 (33762034-33761920)
	461-575, gnl\|Hg17\|chr9 (33026959-33027076)
	461-575, gnl\|Mm7\|chr4 (40870489-40870602)