Non-Coding RNA Search

Ss1.1-rfcc15b_m13.5

Sequence:


               
               TTTCTAAATTTTTGAGGTGCTTTGCTCTTTCTTGTGTGACCTGATAGCTTCCTGGAACTT
GGGGTCTGTGTGTGACGGATGAGACTCAGAGTTGGAGTTCTCCAGCTCTGAAGGTGCTGA
AGGAACTGCATGATTTCTGGAAGACGACTCCATGCAGCAGTTTTAAAGAAGCTGAAGAGG
GGACCAGACTTCTACTGGGAATGTGAATGGGGCTGATCTGGCTAGGACTGATGAATCAGA
AGGGGTGGAGGATGGTATTGTTGGGGGACTTTAATTTCTGTGTGAGACCAAAGGAGGAGA
GATGTATTTGGTTCAAAATGTAAGTTTTATGCGGCACACTGTGTGATGTAACCTGTCTGG
TCAGTTGGTTGGGACAACCTTACTCAGCTTTACTCGACGTGGAACTGAGAATAGAACATG
AGATAGGTCTTGGTGTTCTGTATAATTGATAGAATACCCTGATGCATTTTAAGGCATTCT
GGGCATAAAATAAAAGCGATATTTGCAAAAGCCCTTGAAGGTCTGGGGAAGAAAAGCAAG
GGCTGTCTGTTTGGGACCCTAAACTGGATAGGGACTAAGTACTTTCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTAAATTTTTGAGGTGCTTTGCTCTTTCTTGTGTGACCTGATAGCTTCCTGGAACTT
GGGGTCTGTGTGTGACGGATGAGACTCAGAGTTGGAGTTCTCCAGCTCTGAAGGTGCTGA
AGGAACTGCATGATTTCTGGAAGACGACTCCATGCAGCAGTTTTAAAGAAGCTGAAGAGG
GGACCAGACTTCTACTGGGAATGTGAATGGGGCTGATCTGGCTAGGACTGATGAATCAGA
AGGGGTGGAGGATGGTATTGTTGGGGGACTTTAATTTCTGTGTGAGACCAAAGGAGGAGA
GATGTATTTGGTTCAAAATGTAAGTTTTATGCGGCACACTGTGTGATGTAACCTGTCTGG
TCAGTTGGTTGGGACAACCTTACTCAGCTTTACTCGACGTGGAACTGAGAATAGAACATG
AGATAGGTCTTGGTGTTCTGTATAATTGATAGAATACCCTGATGCATTTTAAGGCATTCT
GGGCATAAAATAAAAGCGATATTTGCAAAAGCCCTTGAAGGTCTGGGGAAGAAAAGCAAG
GGCTGTCTGTTTGGGACCCTAAACTGGATAGGGACTAAGTACTTTCAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-588, gnl|bosTau2|chr6 (68039001-68039581)
               

               
               2-588, gnl|Hg17|chr4 (6761817-6762399)
               

               
               2-588, gnl|Mm7|chr5 (35876987-35876432)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-588, gnl|bosTau2|chr6 (68039001-68039581)
               

               
               2-588, gnl|Hg17|chr4 (6761817-6762399)
               

               
               2-588, gnl|Mm7|chr5 (35876987-35876432)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fcc (0.39557)
               

               
               lnt (0.142308)
               

               
               ese (0.126502)
               

               
               med (0.116252)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.39557)
               

               
               lnt (0.142308)
               

               
               ese (0.126502)
               

               
               med (0.116252)

	2-588, gnl\|bosTau2\|chr6 (68039001-68039581)
	2-588, gnl\|Hg17\|chr4 (6761817-6762399)
	2-588, gnl\|Mm7\|chr5 (35876987-35876432)