Ss1.1-rfcc16b_m22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGATATTGAAGTTCCGAAGGCCAGGGGGGACATTTTGAGTCGCTGCTGGTGCCATTTAC ATGGATAGTGGAATGTCACTGGAGGTGGTTGGGCAGGTGTACTATCCGATGATGCGGCCG CTAATAGAAAAATTTTCTGCAAACGTGCCCCGTTCGCCTGTGCGAGAATTGCTTGAAATG GAACCAGAAACCGCCAAATTTAGCACAGACGAGCACTGCACTTGGTACCACGCTTTACCT CATTTCAAGGCAAATGTGCTTAACCGAGAGGAAAAAATGTGGTTTGGCCTCGCTGCTGTT AAATCTGCAGCAGCACGACGAGCCCTGCGAAGCCTCAAAGCTAATCAAATGGACTCGCGC AACTGAAATAGGTCATTTTTGTCTGTGGCATTTTCACTGTTTGTGAGAGTATGACAAAGA TTTGTTAACTCTTAATTTCGTTTTAAAGATGTTTGTTACATTTCCCCCCCTTTTTCCCTT GATGTCACGTGAAGTCATGAAATTTACAGTGACCTCTCACACTCCTGTCATTGTCAGTGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGATATTGAAGTTCCGAAGGCCAGGGGGGACATTTTGAGTCGCTGCTGGTGCCATTTAC ATGGATAGTGGAATGTCACTGGAGGTGGTTGGGCAGGTGTACTATCCGATGATGCGGCCG CTAATAGAAAAATTTTCTGCAAACGTGCCCCGTTCGCCTGTGCGAGAATTGCTTGAAATG GAACCAGAAACCGCCAAATTTAGCACAGACGAGCACTGCACTTGGTACCACGCTTTACCT CATTTCAAGGCAAATGTGCTTAACCGAGAGGAAAAAATGTGGTTTGGCCTCGCTGCTGTT AAATCTGCAGCAGCACGACGAGCCCTGCGAAGCCTCAAAGCTAATCAAATGGACTCGCGC AACTGAAATAGGTCATTTTTGTCTGTGGCATTTTCACTGTTTGTGAGAGTATGACAAAGA TTTGTTAACTCTTAATTTCGTTTTAAAGATGTTTGTTACATTTCCCCCCCTTTTTCCCTT GATGTCACGTGAAGTCATGAAATTTACAGTGACCTCTCACACTCCTGTCATTGTCAGTGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-125, gnl|bosTau2|chr21 (40007146-40007272) | |
| 1-125, gnl|canFam2|chr8 (67014340-67014526) | |
| 1-125, gnl|danRer3|chr17 (20915668-20915435) | |
| 1-125, gnl|dasNov1|scaffold_7911 (57106-56920) | |
| 1-125, gnl|echTel1|scaffold_187715 (575-755) | |
| 1-125, gnl|fr1|chrUn (24863108-24862925) | |
| 1-125, gnl|galGal2|chr5 (42638808-42638992) | |
| 1-125, gnl|hg17|chr14 (94627275-94627461) | |
| 1-125, gnl|Hg17|chr14 (94627421-94627295) | |
| 1-125, gnl|loxAfr1|scaffold_856 (78415-78229) | |
| 1-125, gnl|mm7|chr12 (102186605-102186793) | |
| 1-125, gnl|Mm7|chr12 (102186753-102186627) | |
| 1-125, gnl|monDom2|scaffold_6 (73004462-73004644) | |
| 1-125, gnl|oryCun1|scaffold_213205 (106320-106135) | |
| 1-125, gnl|panTro1|chr15 (95066081-95066267) | |
| 1-125, gnl|rheMac2|chr7 (158330696-158330882) | |
| 1-125, gnl|rn3|chr6 (128782311-128782499) | |
| 1-125, gnl|tetNig1|chrUn_random (116384005-116383822) | |
| 1-125, gnl|xenTro1|scaffold_144 (1712990-1712794) | |
| 198-528, gnl|bosTau2|chr21 (40010998-40011331) | |
| 198-528, gnl|Hg17|chr14 (94623708-94623374) | |
| 198-528, gnl|Mm7|chr12 (102183348-102183041) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-125, gnl|bosTau2|chr21 (40007146-40007272) | |
| 1-125, gnl|canFam2|chr8 (67014340-67014526) | |
| 1-125, gnl|danRer3|chr17 (20915668-20915435) | |
| 1-125, gnl|dasNov1|scaffold_7911 (57106-56920) | |
| 1-125, gnl|echTel1|scaffold_187715 (575-755) | |
| 1-125, gnl|fr1|chrUn (24863108-24862925) | |
| 1-125, gnl|galGal2|chr5 (42638808-42638992) | |
| 1-125, gnl|hg17|chr14 (94627275-94627461) | |
| 1-125, gnl|Hg17|chr14 (94627421-94627295) | |
| 1-125, gnl|loxAfr1|scaffold_856 (78415-78229) | |
| 1-125, gnl|mm7|chr12 (102186605-102186793) | |
| 1-125, gnl|Mm7|chr12 (102186753-102186627) | |
| 1-125, gnl|monDom2|scaffold_6 (73004462-73004644) | |
| 1-125, gnl|oryCun1|scaffold_213205 (106320-106135) | |
| 1-125, gnl|panTro1|chr15 (95066081-95066267) | |
| 1-125, gnl|rheMac2|chr7 (158330696-158330882) | |
| 1-125, gnl|rn3|chr6 (128782311-128782499) | |
| 1-125, gnl|tetNig1|chrUn_random (116384005-116383822) | |
| 1-125, gnl|xenTro1|scaffold_144 (1712990-1712794) | |
| 198-528, gnl|bosTau2|chr21 (40010998-40011331) | |
| 198-528, gnl|Hg17|chr14 (94623708-94623374) | |
| 198-528, gnl|Mm7|chr12 (102183348-102183041) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.197785) | |
| spl (0.143184) |