Non-Coding RNA Search

Ss1.1-rfcc19b_i17.5

Sequence:


               
               GCGGCCGCGTTCTTGGCCCTACTCCAGGGGAACCTCGATTTTCCAAACTCGGGAAGGCCG
GCTGTCCTTCGGCTACTGATAAGGACGCAAGCGCCGGGTAAAAGATTTTAACAATGCCCG
GAAAGAAATAGTCGGACCCAAGAAAGAGACTAATAATAGCCGCCAGCTAGAGTTCTGCTC
CTGTGCTCAGCGGTCTTAAGAACAATAATAACGACAACAACCACAATA------------
------------------------------------------------------------
GTTTTCCCTGTCCCTGCACTGCTCGTTTGGTCACCTTTTGAGAGAAAAGAACACTGATCC
CATTAAAAGGGCCTGTTGTTTGCCAGATGAGGTCACCAGACTGGTAAGTAGCAAGGCTGG
GACTCCACTAGGAATATCTGACTTTAAAAGCCATGTTCCTGTCACCCAGAATGCACATGC
TGATGCAGCTGAACAGAAGAGCTTTAAAGGTTGGCTTCTGGAGGATTTTCCTGTTCTCAG
ATGTCAGACACACATCCTCCCTCAGACCCCTTACTTTTCCAGAAGTTGGCTCTGGGAATT
CAGTCAAGGTGAGGCAATGGTTGATGATATCACTAGGCTTGTTTGAAGAGATTGACAGGC
CAGCTCTGGAATCACCAACTGGAGGTTTTTCCAAACTGGGAAACCAAGGCAGAAGGGACT
TCATGAGACTTGTCACTAACAGTTCTGATTCTCTCGCCCTATGTCTTTGAACTAGAAGGA
TTCCCCTCTTACCCAACACAAGAGAGACCTGAATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCCGCGTTCTTGGCCCTACTCCAGGGGAACCTCGATTTTCCAAACTCGGGAAGGCCG
GCTGTCCTTCGGCTACTGATAAGGACGCAAGCGCCGGGTAAAAGATTTTAACAATGCCCG
GAAAGAAATAGTCGGACCCAAGAAAGAGACTAATAATAGCCGCCAGCTAGAGTTCTGCTC
CTGTGCTCAGCGGTCTTAAGAACAATAATAACGACAACAACCACAATA------------
------------------------------------------------------------
GTTTTCCCTGTCCCTGCACTGCTCGTTTGGTCACCTTTTGAGAGAAAAGAACACTGATCC
CATTAAAAGGGCCTGTTGTTTGCCAGATGAGGTCACCAGACTGGTAAGTAGCAAGGCTGG
GACTCCACTAGGAATATCTGACTTTAAAAGCCATGTTCCTGTCACCCAGAATGCACATGC
TGATGCAGCTGAACAGAAGAGCTTTAAAGGTTGGCTTCTGGAGGATTTTCCTGTTCTCAG
ATGTCAGACACACATCCTCCCTCAGACCCCTTACTTTTCCAGAAGTTGGCTCTGGGAATT
CAGTCAAGGTGAGGCAATGGTTGATGATATCACTAGGCTTGTTTGAAGAGATTGACAGGC
CAGCTCTGGAATCACCAACTGGAGGTTTTTCCAAACTGGGAAACCAAGGCAGAAGGGACT
TCATGAGACTTGTCACTAACAGTTCTGATTCTCTCGCCCTATGTCTTTGAACTAGAAGGA
TTCCCCTCTTACCCAACACAAGAGAGACCTGAATAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               429-744, gnl|bosTau2|chr15 (48054539-48054856)
               

               
               429-744, gnl|Hg17|chr11 (46218817-46219437)
               

               
               429-744, gnl|Mm7|chr2 (91908109-91907817)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               429-744, gnl|bosTau2|chr15 (48054539-48054856)
               

               
               429-744, gnl|Hg17|chr11 (46218817-46219437)
               

               
               429-744, gnl|Mm7|chr2 (91908109-91907817)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fcc (0.197785)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)

	429-744, gnl\|bosTau2\|chr15 (48054539-48054856)
	429-744, gnl\|Hg17\|chr11 (46218817-46219437)
	429-744, gnl\|Mm7\|chr2 (91908109-91907817)