Non-Coding RNA Search

Ss1.1-rfcc29b_a12.5

Sequence:


               
               GTTTTGAAAGGCTTTTATCCCCTTCATTTTATGAATGAAAAGACTTAATTTTCCTTCAGT
GCTTGATGCTCTAGCCAAGACTTTACTCTTTTGGGAAATGTCACAGTGATCTTTTAAATT
TTTTAAATTAAGAAACTAATGAATTGTCACAGGACTGTGTTGCTCCTCACCCTAAATTAA
GAGAATGCCCTGATAGATTAGAATTCAACTTTGAGTTCATATTTGGATTGTATTATTATT
GTCCGTGCATTTCATTTATTGCTTATCTTCTTGTAAATCTGTCTTTTGTAGGGGGAGGGG
ATTTAACAGTTGGAAAGAAAAAAACCCTATCATTTATGCACTTAAAATAGTTTAAAAATT
GATAACTGCCATATAGATTATAAATTAAAATGGACAGTTGATGATTATCTAGATAATGCA
AGGCACAATATCTACACTGACCACCTAATTACACTAGATTTTAATACTGAAAACTTTTTG
CAATTATCCACAGCCATATATTCAGTAATGGATGGTGGTTAATAGCCTGTTTATTGCATA
ATGAATTGTTCATTCATCATAATGGGATGTCAGAATTTTTCAGGCATTCTGATCTACTCT
CTAAATTTTTCCAAAATTGGCACAAAGTGCTAAGATTTATATACACTTATTGTAACTTGT
ATTCTTGTGCCTTGGTTTTATCACCTCAATGCACTGTACCCTATAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTGAAAGGCTTTTATCCCCTTCATTTTATGAATGAAAAGACTTAATTTTCCTTCAGT
GCTTGATGCTCTAGCCAAGACTTTACTCTTTTGGGAAATGTCACAGTGATCTTTTAAATT
TTTTAAATTAAGAAACTAATGAATTGTCACAGGACTGTGTTGCTCCTCACCCTAAATTAA
GAGAATGCCCTGATAGATTAGAATTCAACTTTGAGTTCATATTTGGATTGTATTATTATT
GTCCGTGCATTTCATTTATTGCTTATCTTCTTGTAAATCTGTCTTTTGTAGGGGGAGGGG
ATTTAACAGTTGGAAAGAAAAAAACCCTATCATTTATGCACTTAAAATAGTTTAAAAATT
GATAACTGCCATATAGATTATAAATTAAAATGGACAGTTGATGATTATCTAGATAATGCA
AGGCACAATATCTACACTGACCACCTAATTACACTAGATTTTAATACTGAAAACTTTTTG
CAATTATCCACAGCCATATATTCAGTAATGGATGGTGGTTAATAGCCTGTTTATTGCATA
ATGAATTGTTCATTCATCATAATGGGATGTCAGAATTTTTCAGGCATTCTGATCTACTCT
CTAAATTTTTCCAAAATTGGCACAAAGTGCTAAGATTTATATACACTTATTGTAACTTGT
ATTCTTGTGCCTTGGTTTTATCACCTCAATGCACTGTACCCTATAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               537-708, gnl|bosTau2|chr29 (3747845-3747675)
               

               
               537-708, gnl|Hg17|chr15 (57601656-57601814)
               

               
               537-708, gnl|Mm7|chr9 (70121917-70121747)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               537-708, gnl|bosTau2|chr29 (3747845-3747675)
               

               
               537-708, gnl|Hg17|chr15 (57601656-57601814)
               

               
               537-708, gnl|Mm7|chr9 (70121917-70121747)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               fco (0.157208)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               fco (0.157208)

	537-708, gnl\|bosTau2\|chr29 (3747845-3747675)
	537-708, gnl\|Hg17\|chr15 (57601656-57601814)
	537-708, gnl\|Mm7\|chr9 (70121917-70121747)