Non-Coding RNA Search

Ss1.1-rfcc29b_a8.5

Sequence:


               
               AATTTAATTTTTTTTAACAGACTGTTAATTTTCGTTACCTTTCGGAGTCTGTTGGCAACT
AAACATGTGAACAGAAAACAAATTGGAAAAGTCCTCCCCCCGCACCCCCAACCAGAGCAG
AGAACCAGACACATGAAAAACATCTTGCTGTTAACTCGGAGGTCGATCTAATTGTGAAAT
AGTTCTCACCTCGTGAAACATCTCAGTCAATCCATAGTTGCTCCGCCAAACAGCCGTTAG
AGTTATTTACTCCGGGGAAAACTGTAGAGCAGTAACCTGTGCTGATGCAGAAAAAACCAA
AACATTATGTTCAAAACAGAGATGCATCCTGACATGGTTTCGAAAACCAGAGCATATGCC
TGTGCGTACGCTTCCCGCCGTCTCCGCAGACCACACGTGTCTCTCGCGTGTCCTTCTACA
GCCATCTCAATATATTTGACACTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTTAATTTTTTTTAACAGACTGTTAATTTTCGTTACCTTTCGGAGTCTGTTGGCAACT
AAACATGTGAACAGAAAACAAATTGGAAAAGTCCTCCCCCCGCACCCCCAACCAGAGCAG
AGAACCAGACACATGAAAAACATCTTGCTGTTAACTCGGAGGTCGATCTAATTGTGAAAT
AGTTCTCACCTCGTGAAACATCTCAGTCAATCCATAGTTGCTCCGCCAAACAGCCGTTAG
AGTTATTTACTCCGGGGAAAACTGTAGAGCAGTAACCTGTGCTGATGCAGAAAAAACCAA
AACATTATGTTCAAAACAGAGATGCATCCTGACATGGTTTCGAAAACCAGAGCATATGCC
TGTGCGTACGCTTCCCGCCGTCTCCGCAGACCACACGTGTCTCTCGCGTGTCCTTCTACA
GCCATCTCAATATATTTGACACTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-444, gnl|bosTau2|chr6 (54545891-54545455)
               

               
               1-444, gnl|Hg17|chr4 (82705158-82704737)
               

               
               1-444, gnl|Mm7|chr5 (98432600-98432211)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-444, gnl|bosTau2|chr6 (54545891-54545455)
               

               
               1-444, gnl|Hg17|chr4 (82705158-82704737)
               

               
               1-444, gnl|Mm7|chr5 (98432600-98432211)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               fce (0.271592)
               

               
               fcc (0.197785)
               

               
               nca (0.136874)
               

               
               kid (0.129735)
               

               
               spc (0.113366)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               fcc (0.197785)
               

               
               nca (0.136874)
               

               
               kid (0.129735)
               

               
               spc (0.113366)

	1-444, gnl\|bosTau2\|chr6 (54545891-54545455)
	1-444, gnl\|Hg17\|chr4 (82705158-82704737)
	1-444, gnl\|Mm7\|chr5 (98432600-98432211)

	fce (0.271592)
	fcc (0.197785)
	nca (0.136874)
	kid (0.129735)
	spc (0.113366)