Ss1.1-rfcc31b_h12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGTGTTTTTGAGATACAGAGGCCAAGGCACTAGGGAAGGGCAAAGTACTATTTGGACTT TCGGAAGATGAAATGGTACCATAAATGCTGCTATTCTGAGAGCCATTTTAAACTGCACTG CTCCAACCACCCCCGCTTCTCATCACCAGGACAGCAGGTCGAGAAAATGTCTTTCCTTTC ACTTGCTTCTGGGGTTTGTGATTATTCTAGACACTTAATTTCTTTCCCTTGCTGTATCTC CTTTCCTCACCCCCCTCGACTTGTTCCCTGTTCCGTTTATGCGGAAATGGCAGAAATGCT TGAGAAATGAGAATGTATAAGTGGATTGGAAGTTTATAGTCTGAAATTTCAATTTTACTT TGTACTGTACATCTTTTTACTTTAGAATTTGCAATAAAGGGTTACGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGTGTTTTTGAGATACAGAGGCCAAGGCACTAGGGAAGGGCAAAGTACTATTTGGACTT TCGGAAGATGAAATGGTACCATAAATGCTGCTATTCTGAGAGCCATTTTAAACTGCACTG CTCCAACCACCCCCGCTTCTCATCACCAGGACAGCAGGTCGAGAAAATGTCTTTCCTTTC ACTTGCTTCTGGGGTTTGTGATTATTCTAGACACTTAATTTCTTTCCCTTGCTGTATCTC CTTTCCTCACCCCCCTCGACTTGTTCCCTGTTCCGTTTATGCGGAAATGGCAGAAATGCT TGAGAAATGAGAATGTATAAGTGGATTGGAAGTTTATAGTCTGAAATTTCAATTTTACTT TGTACTGTACATCTTTTTACTTTAGAATTTGCAATAAAGGGTTACGTC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 118-237, + strand, RNAz p=0.682994 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 118-237, + strand, RNAz p=0.682994 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of AK091315, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-408, gnl|bosTau2|chr5 (21432926-21433333) | |
| 1-408, gnl|Hg17|chr12 (50492496-50492896) | |
| 1-408, gnl|Mm7|chr15 (101030762-101031155) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-408, gnl|bosTau2|chr5 (21432926-21433333) | |
| 1-408, gnl|Hg17|chr12 (50492496-50492896) | |
| 1-408, gnl|Mm7|chr15 (101030762-101031155) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fcc (0.39557) | |
| fco (0.314416) | |
| fhi (0.169578) | |
| ecc (0.115035) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.39557) | |
| fco (0.314416) | |
| fhi (0.169578) | |
| ecc (0.115035) |