Non-Coding RNA Search

Ss1.1-rfcc34b_g5.5

Sequence:


               
               TTGGGGGGGGTTGGGTTTTTTTTGGTTTTGTTGTTGTTGTTGTTTTGTTGTTTTTTTTTC
TTTGTGAGGGGACCCTTACTCTGTTATCCCAAGTGCTCTTATTCTGGTGAGGAGAACCCT
AATTTCATGATTTGGGAAGGAATGGGTGACGGACACTACTACAGTCCACTAGGATGGGGT
GGATGGTTTTTGGGGGGATGGGGCGGGGGAAATACTTTCTGTTGTTTGTTCTCCTGGGGC
CCCACCCTCCACCTTGTTTTCAGCTTCTCGCTGCCTCCCTCTGAGCCAGGATTGTCCAGT
TGCTGAAATGTAAATACTTATGTATTGGGGGAGGGGAGCTCCAACTGTATCTTTCTCTCC
CTTCTCCCCCTGCCTGGATTATTTAAAAAGCCATGTGTGGAAACCCACTATTTAATAAAC
GTAATAGAATCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGGGGGGGTTGGGTTTTTTTTGGTTTTGTTGTTGTTGTTGTTTTGTTGTTTTTTTTTC
TTTGTGAGGGGACCCTTACTCTGTTATCCCAAGTGCTCTTATTCTGGTGAGGAGAACCCT
AATTTCATGATTTGGGAAGGAATGGGTGACGGACACTACTACAGTCCACTAGGATGGGGT
GGATGGTTTTTGGGGGGATGGGGCGGGGGAAATACTTTCTGTTGTTTGTTCTCCTGGGGC
CCCACCCTCCACCTTGTTTTCAGCTTCTCGCTGCCTCCCTCTGAGCCAGGATTGTCCAGT
TGCTGAAATGTAAATACTTATGTATTGGGGGAGGGGAGCTCCAACTGTATCTTTCTCTCC
CTTCTCCCCCTGCCTGGATTATTTAAAAAGCCATGTGTGGAAACCCACTATTTAATAAAC
GTAATAGAATCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               54-432, gnl|bosTau2|chrX (26207470-26207848)
               

               
               54-432, gnl|Hg17|chrX (48527102-48526710)
               

               
               54-432, gnl|Mm7|chrX (6316202-6316579)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               54-432, gnl|bosTau2|chrX (26207470-26207848)
               

               
               54-432, gnl|Hg17|chrX (48527102-48526710)
               

               
               54-432, gnl|Mm7|chrX (6316202-6316579)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cga (0.279096)
               

               
               fcc (0.197785)
               

               
               cly (0.120642)
               

               
               nbm (0.0993246)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cga (0.279096)
               

               
               fcc (0.197785)
               

               
               cly (0.120642)
               

               
               nbm (0.0993246)

	54-432, gnl\|bosTau2\|chrX (26207470-26207848)
	54-432, gnl\|Hg17\|chrX (48527102-48526710)
	54-432, gnl\|Mm7\|chrX (6316202-6316579)