Non-Coding RNA Search

Ss1.1-rfcc34b_l19.5

Sequence:


               
               TCAGCAAGACTTGTGAGATGCTATTGTGAAGATAAACATTAATGACCTTAGTTTCTGAAA
TGAGGGCATCTTCATCAGATCATTCATCTGTAACAGAGCTTGAGGCATGTGTAGTATTGA
TTTATAATGCTTGGAAGGGATAACTGTACCACACAATGTCAAGCTAAAGAGCTGAATACA
TACTATTAGTAAAATAGGCACTTTTATGTCTTTTCTTTTTTGTGATCATTGGTGGACTGA
CCAATGTGCTCCTCCATTTCCAAAATTTGTATAAAGATCCCAGTTAGAAAAATCCCTGAG
GTACTGAATTTATGTTGGCTATTTATGTCTTAATACAAATACCGTTTTATTGTTATTGCT
GTTATATGCCTTTTTGATCCAGTTTCCTTAACCGCAGATAGTTGTAAATTGCTTGCTCAA
TTTTTAGTAATTATCGATACTGACACCTGAGTTGTAGATTTTTTGGTGTTGTTCAATGTA
ATAAAGAGATCAAGCCACCATTCTGCCTGTAAGATAAATAAAATTAACTGGAAAATAAAT
GTGTATCCTGAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGCAAGACTTGTGAGATGCTATTGTGAAGATAAACATTAATGACCTTAGTTTCTGAAA
TGAGGGCATCTTCATCAGATCATTCATCTGTAACAGAGCTTGAGGCATGTGTAGTATTGA
TTTATAATGCTTGGAAGGGATAACTGTACCACACAATGTCAAGCTAAAGAGCTGAATACA
TACTATTAGTAAAATAGGCACTTTTATGTCTTTTCTTTTTTGTGATCATTGGTGGACTGA
CCAATGTGCTCCTCCATTTCCAAAATTTGTATAAAGATCCCAGTTAGAAAAATCCCTGAG
GTACTGAATTTATGTTGGCTATTTATGTCTTAATACAAATACCGTTTTATTGTTATTGCT
GTTATATGCCTTTTTGATCCAGTTTCCTTAACCGCAGATAGTTGTAAATTGCTTGCTCAA
TTTTTAGTAATTATCGATACTGACACCTGAGTTGTAGATTTTTTGGTGTTGTTCAATGTA
ATAAAGAGATCAAGCCACCATTCTGCCTGTAAGATAAATAAAATTAACTGGAAAATAAAT
GTGTATCCTGAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-553, gnl|bosTau2|chr14 (21576066-21576618)
               

               
               1-553, gnl|Hg17|chr8 (75441121-75441666)
               

               
               1-553, gnl|Mm7|chr1 (17352999-17353518)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-553, gnl|bosTau2|chr14 (21576066-21576618)
               

               
               1-553, gnl|Hg17|chr8 (75441121-75441666)
               

               
               1-553, gnl|Mm7|chr1 (17352999-17353518)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbe (0.239234)
               

               
               fcc (0.197785)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               fcc (0.197785)

	1-553, gnl\|bosTau2\|chr14 (21576066-21576618)
	1-553, gnl\|Hg17\|chr8 (75441121-75441666)
	1-553, gnl\|Mm7\|chr1 (17352999-17353518)