Non-Coding RNA Search

Ss1.1-rfce01c_f8.5

Sequence:


               
               TTTCTTTCTAAGATCTTAGGAGGTGTGGCCATTTGAAAAGCCTTCATTTTTAAAAAATTT
TTAATTTAAATTTTTATTTATTTTTGCATTTTAGGG------------------------
------------------------------------------------------------
------------------------------------------------CATGGATCCTAG
TTGGATTTGTTTCCACTGCACCACAACAGGAGCCCCAAGCCTTCATGTTGTATCACCGCG
GATATTTATGGTTATACTTTTGTGTGAGGGCTGATTGATGGGGGTGTTACGTGAACATTC
CCCCTGCTTGTTTTCTGTGCTTTATGGGAGTAATGTGTGCTTTCTGTTTTAGATAATTTA
CTGTTCTCCACTGTGGAGAGAGCGTATTGCTGTAAGGCAAAAACAGCGTGATTGATAATG
TGGGTATAAAACAAGCCAAGAGTCGCGGTCCTCATGTGTATAATAGATTCTGTCAGGCGA
GGGGCAACTGGAAAAGGTGCAAAGAGAGAGAATAGAAATGAAACTAAGAAATAATCTCTC
CATATTTGTCTTCTTTAATGTCACCAGCCTGGATCAACAGACGTTAAAAAACATAGAAAC
AATGAGTGAAAAATTATATTGTAATGATACGTCCATTAGTTTCATGTGAGTTCTTGGATC
TTGTTTTACCCGGCATTTTCCTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTTTCTAAGATCTTAGGAGGTGTGGCCATTTGAAAAGCCTTCATTTTTAAAAAATTT
TTAATTTAAATTTTTATTTATTTTTGCATTTTAGGG------------------------
------------------------------------------------------------
------------------------------------------------CATGGATCCTAG
TTGGATTTGTTTCCACTGCACCACAACAGGAGCCCCAAGCCTTCATGTTGTATCACCGCG
GATATTTATGGTTATACTTTTGTGTGAGGGCTGATTGATGGGGGTGTTACGTGAACATTC
CCCCTGCTTGTTTTCTGTGCTTTATGGGAGTAATGTGTGCTTTCTGTTTTAGATAATTTA
CTGTTCTCCACTGTGGAGAGAGCGTATTGCTGTAAGGCAAAAACAGCGTGATTGATAATG
TGGGTATAAAACAAGCCAAGAGTCGCGGTCCTCATGTGTATAATAGATTCTGTCAGGCGA
GGGGCAACTGGAAAAGGTGCAAAGAGAGAGAATAGAAATGAAACTAAGAAATAATCTCTC
CATATTTGTCTTCTTTAATGTCACCAGCCTGGATCAACAGACGTTAAAAAACATAGAAAC
AATGAGTGAAAAATTATATTGTAATGATACGTCCATTAGTTTCATGTGAGTTCTTGGATC
TTGTTTTACCCGGCATTTTCCTGA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               156-610, gnl|bosTau2|chr8 (35768364-35767899)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               156-610, gnl|bosTau2|chr8 (35768364-35767899)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fce (0.271592)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               med (0.116252)