Non-Coding RNA Search

Ss1.1-rfce03c_f2.5

Sequence:


               
               CTGCAGGCATTTGTGAGCTTTATTTCACTTGAAAAAAAAAACAAGACTTGTTCTATAAGA
GTCTTTTACTACGATACAATGTCAACTTAATTTTGGGTAAATGTAACTCTGCTAATGCTT
GCCTTGATGCTTTTGTTAGGTTGGTGGAATCCAGATTCCAACCGGTAGTGACTGTGAACC
TCTGCTTTTAAATGTTCTTCATCTGGGCACAAGCAGCGAAGGAGAGGAGAGTCAGCAGTT
GGTGGAATCTCCGCATGTCTTTCCATCTAACGCGGAACTAGGCACTGTGTTCGCAGCCTT
GTCAGTCCCAGAAGGGGTCGTCTTAATCAACAGCACCACATCTCTAGGTGAGGAGAGCTG
GACCGCCCTTGCCAAGGAAGACTTGAAGAAGACTTTCAGAGAACAAGGTCTCAGAAATGG
AAGCACAGTTTTAATTCAGGATTCTAATGATGATAGCAGTTTTTTGACCAAACAAGGGAA
ATGGATCACTAGTACGAATGAGATTGACTGGCTCCAAGTTAAAAATTTATGCCAATTAGA
ATCTGAAGAGGAGCAAGTTAAAATATCAGCAACTCTTAACACACTGAAAACAGCTGTTTG
AGGCCTATTGACAGAAAGGGGAAGCTTCTTTGTCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGGCATTTGTGAGCTTTATTTCACTTGAAAAAAAAAACAAGACTTGTTCTATAAGA
GTCTTTTACTACGATACAATGTCAACTTAATTTTGGGTAAATGTAACTCTGCTAATGCTT
GCCTTGATGCTTTTGTTAGGTTGGTGGAATCCAGATTCCAACCGGTAGTGACTGTGAACC
TCTGCTTTTAAATGTTCTTCATCTGGGCACAAGCAGCGAAGGAGAGGAGAGTCAGCAGTT
GGTGGAATCTCCGCATGTCTTTCCATCTAACGCGGAACTAGGCACTGTGTTCGCAGCCTT
GTCAGTCCCAGAAGGGGTCGTCTTAATCAACAGCACCACATCTCTAGGTGAGGAGAGCTG
GACCGCCCTTGCCAAGGAAGACTTGAAGAAGACTTTCAGAGAACAAGGTCTCAGAAATGG
AAGCACAGTTTTAATTCAGGATTCTAATGATGATAGCAGTTTTTTGACCAAACAAGGGAA
ATGGATCACTAGTACGAATGAGATTGACTGGCTCCAAGTTAAAAATTTATGCCAATTAGA
ATCTGAAGAGGAGCAAGTTAAAATATCAGCAACTCTTAACACACTGAAAACAGCTGTTTG
AGGCCTATTGACAGAAAGGGGAAGCTTCTTTGTCCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61858360|ref|XP_605407.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61858360|ref|XP_605407.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-459, gnl|bosTau2|chr3 (80447477-80447928)
               

               
               10-459, gnl|Hg17|chr2 (234214260-234213816)
               

               
               10-459, gnl|Mm7|chr1 (87882412-87881953)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-459, gnl|bosTau2|chr3 (80447477-80447928)
               

               
               10-459, gnl|Hg17|chr2 (234214260-234213816)
               

               
               10-459, gnl|Mm7|chr1 (87882412-87881953)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fce (0.271592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)

	10-459, gnl\|bosTau2\|chr3 (80447477-80447928)
	10-459, gnl\|Hg17\|chr2 (234214260-234213816)
	10-459, gnl\|Mm7\|chr1 (87882412-87881953)