Non-Coding RNA Search

Ss1.1-rfce09c_f3.5

Sequence:


               
               NGAAAAAGCACAACATGCCTTTCTGGCGGATATCCTGCCACGCAGACCTGGAGGCGCTGA
GGCACGCCCTGGAGCTGGAGTATTTATAGCAGAACTCGCGGCATCGCCACCTGCCATCGC
AGCTGCATCCCACCCGCCCGGGCCCCTGGTTTTCCCTGCCTCCCCGCCAGATGCTGGAAG
AGTCCCTCCAGCCAAGAGGACGTGTCCGGTGACCATCTCAGAAGCTGGCCTTTCAGTGCA
AACACGGGGCCTGAGAAACAGAGTAGCCTGCAGTGGCTTTGGAACATTTTCCCTTTGGGG
CAAAGGGCTGGCTCGCTTGGAGACCTTCCTAAAAGACTCACGGAACACAAGCAAGGAATT
GCTGATTTGGGGGAGGCTGGGGATGAGGAGGAGGGAGACAGGCTTTTTTCTTTTCCTCTT
TAATTTATGGACTAATCATTACTCTGGTATTATGCTCTTGTACCTGTGTTGTTGGTTCTC
GTAGTCGTTGGTTTTTTGTTTTCTAAGCCGGCATGTGGGCAGTGCACAGTTCTAATTTAA
GCCTCTCTGCTCCAAGTTGTGCTGTGGGGGGGACAGTCATTCTTTGAACATAGTGAGGGA
GGCAATTCGGGGCTGTGGGGAGGACTATTGCTTTTTTTGTCTGTTTTTAAGGACCTAACC
TGACGTCATGTGGACAGTGCACGTGCCTTATGCTGCCATCTTGTTTTCTAGGAAGAGGGG
ACCCTGGGGAGGAGGCAGTACTTTGTGACGGAAAAAGGCATTAAATAAAACCACGTTTAC
ATTTTGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               NGAAAAAGCACAACATGCCTTTCTGGCGGATATCCTGCCACGCAGACCTGGAGGCGCTGA
GGCACGCCCTGGAGCTGGAGTATTTATAGCAGAACTCGCGGCATCGCCACCTGCCATCGC
AGCTGCATCCCACCCGCCCGGGCCCCTGGTTTTCCCTGCCTCCCCGCCAGATGCTGGAAG
AGTCCCTCCAGCCAAGAGGACGTGTCCGGTGACCATCTCAGAAGCTGGCCTTTCAGTGCA
AACACGGGGCCTGAGAAACAGAGTAGCCTGCAGTGGCTTTGGAACATTTTCCCTTTGGGG
CAAAGGGCTGGCTCGCTTGGAGACCTTCCTAAAAGACTCACGGAACACAAGCAAGGAATT
GCTGATTTGGGGGAGGCTGGGGATGAGGAGGAGGGAGACAGGCTTTTTTCTTTTCCTCTT
TAATTTATGGACTAATCATTACTCTGGTATTATGCTCTTGTACCTGTGTTGTTGGTTCTC
GTAGTCGTTGGTTTTTTGTTTTCTAAGCCGGCATGTGGGCAGTGCACAGTTCTAATTTAA
GCCTCTCTGCTCCAAGTTGTGCTGTGGGGGGGACAGTCATTCTTTGAACATAGTGAGGGA
GGCAATTCGGGGCTGTGGGGAGGACTATTGCTTTTTTTGTCTGTTTTTAAGGACCTAACC
TGACGTCATGTGGACAGTGCACGTGCCTTATGCTGCCATCTTGTTTTCTAGGAAGAGGGG
ACCCTGGGGAGGAGGCAGTACTTTGTGACGGAAAAAGGCATTAAATAAAACCACGTTTAC
ATTTTGAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               7-788, gnl|bosTau2|chr25 (2075657-2074883)
               

               
               7-788, gnl|Hg17|chr20 (45250106-45250899)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-788, gnl|bosTau2|chr25 (2075657-2074883)
               

               
               7-788, gnl|Hg17|chr20 (45250106-45250899)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cut (0.339847)
               

               
               fce (0.271592)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.339847)
               

               
               fce (0.271592)

	7-788, gnl\|bosTau2\|chr25 (2075657-2074883)
	7-788, gnl\|Hg17\|chr20 (45250106-45250899)