Non-Coding RNA Search

Ss1.1-rfce09c_g11.5

Sequence:


               
               TTTTAATGGCTTCTTGGTGTATAGAAGTTTGTCCATTTGTAATTCTCCGGATTGCGTTCC
TCCTGCCTTTCTTCCCTTCCCCAAGTGATGGCTTTTTCTTTTCTCTTTTTAGTTTCCCCA
GTTTCTTTTTAAGTAATGTGGAAGAAAATGGTTTATTTTGTATTGTGGTATTGAATATTG
TGTTCCTTTTTACAAGGCAACTTGATTGTAAACTTCATGCAACTATAGACTGGAAAAAAC
AAGCCGTGCCAAAGTCTCCCTTCTGTTTCTTCAACACACCGATCCACAGCACACACATTA
CACACCACCACCACCAACGCTTGTGAATGTATTTTTCTGTTAGCTGGGTTTACATGTGAT
GTTTTAGTGCTTTTGCAAGTTCAATTTGTTAGTTCCTGTATGAAAGATTGTGGGGGAAAA
TAAACGTCGTGCCGTTAGCTTTTTCCGTAATAACACCCTTCCTTCTGTAAATACCCGTTA
CCATATTTATCCATTTGTAATTAAATTATGGTATTAACTTGCTACAGAGGAAACAATATT
TATAAAGAATGTTTCTTAACTATAAATATGTACAATTGTGGGCATAAACTGTTTCAGATT
TTTTATTTGAAGGTTTTAAGTGGTTTGATCATTTCTTGTGATATGTTTTGAGAGTAATGC
ATACAGAAATATAATAAAATGTGTTGAAACTGCAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTAATGGCTTCTTGGTGTATAGAAGTTTGTCCATTTGTAATTCTCCGGATTGCGTTCC
TCCTGCCTTTCTTCCCTTCCCCAAGTGATGGCTTTTTCTTTTCTCTTTTTAGTTTCCCCA
GTTTCTTTTTAAGTAATGTGGAAGAAAATGGTTTATTTTGTATTGTGGTATTGAATATTG
TGTTCCTTTTTACAAGGCAACTTGATTGTAAACTTCATGCAACTATAGACTGGAAAAAAC
AAGCCGTGCCAAAGTCTCCCTTCTGTTTCTTCAACACACCGATCCACAGCACACACATTA
CACACCACCACCACCAACGCTTGTGAATGTATTTTTCTGTTAGCTGGGTTTACATGTGAT
GTTTTAGTGCTTTTGCAAGTTCAATTTGTTAGTTCCTGTATGAAAGATTGTGGGGGAAAA
TAAACGTCGTGCCGTTAGCTTTTTCCGTAATAACACCCTTCCTTCTGTAAATACCCGTTA
CCATATTTATCCATTTGTAATTAAATTATGGTATTAACTTGCTACAGAGGAAACAATATT
TATAAAGAATGTTTCTTAACTATAAATATGTACAATTGTGGGCATAAACTGTTTCAGATT
TTTTATTTGAAGGTTTTAAGTGGTTTGATCATTTCTTGTGATATGTTTTGAGAGTAATGC
ATACAGAAATATAATAAAATGTGTTGAAACTGCAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-694, gnl|bosTau2|chr12 (40477514-40478232)
               

               
               1-694, gnl|Hg17|chr13 (99436321-99437020)
               

               
               1-694, gnl|Mm7|chr14 (116884222-116884945)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-694, gnl|bosTau2|chr12 (40477514-40478232)
               

               
               1-694, gnl|Hg17|chr13 (99436321-99437020)
               

               
               1-694, gnl|Mm7|chr14 (116884222-116884945)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               cbe (1.43541)
               

               
               fce (0.814775)
               

               
               spc (0.226732)
               

               
               fco (0.157208)
               

               
               ski (0.146735)
               

               
               ret (0.128733)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (1.43541)
               

               
               fce (0.814775)
               

               
               spc (0.226732)
               

               
               fco (0.157208)
               

               
               ski (0.146735)
               

               
               ret (0.128733)

	1-694, gnl\|bosTau2\|chr12 (40477514-40478232)
	1-694, gnl\|Hg17\|chr13 (99436321-99437020)
	1-694, gnl\|Mm7\|chr14 (116884222-116884945)

	cbe (1.43541)
	fce (0.814775)
	spc (0.226732)
	fco (0.157208)
	ski (0.146735)
	ret (0.128733)