Ss1.1-rfce12c_n22.5
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TCGCAGCCGCCTTGCTGGGCTCCGGGCGGCTCCGGAGGGCGCCTCGCTGATCGCGCTGTC
GGTCATGGAGCCCTTGCGCAAAGCGCTGATCGTGGGCGCAGTGCTGGGCGTGGGGGCTGG
CGTGGGCTCTGCGCTGTTTGTCCTCGTGACCCCGGGAGAGCAGCAGAAGCAGGCGATACT
AAAGGAGATACCGGAGCAGGACCCGCAGCGCAGGGACGAGGCAGCCAGGACCAAACAGCT
ACTGCTGGCCACTCTGCAGGAGGCAGCGGCCACACAAGAGAACGTGGCTTGGAGGAAGAA
CTGGATGAGCGGCGGCGGCGGCGGGAGGTCAGCCTGAGCCCGGACCTGCTCCCGTGGGCG
CCGTGACCTCCGCTCCCACGCAGGAGTCCAAGGCAGCCTTTCTCCTTTGTGGGCCGGCAA
GGAGTCCAGACCCAGATGCCACGCGCAGGCCTCTCCGGGTCCTGGGGAGCTGCTGCTGGG
TGAGCACGTTACCCCCCGCCCCCCAAACCCTGTACTGACTGTGTTTTAACGTCTACGTTG
CGGGCCGGGGCGTCGGATGCGGCTTAACTGAAGGAACCAATAAATCATGTTCCTTCATCC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAGAGTGTTTTGGGGGTCGGTGC
TGCGAGCCCGAAAGACTGCAACTTCCGCCTGCCCCGCCCCCCATGTGAAGCTGAAGCCCA
ATAGGCAGAGCAACCACGTTTTCAAAACACCACTCAGGTCATGTGGTCTGTGTGGAGTGT
TCTTTGGGGATAACCAAGTGACATTCTTGAAATCATAGGTATCCTGGAAACTCGTGTGCA
GTAAATGCCCGTAGAGGACACCTTGGGCTACTTTCCTTTGAATGAGGTTGGTGAGGGGAG |
Blue-coloured subsequences are predicted RNA structures by RNAz
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TCGCAGCCGCCTTGCTGGGCTCCGGGCGGCTCCGGAGGGCGCCTCGCTGATCGCGCTGTC
GGTCATGGAGCCCTTGCGCAAAGCGCTGATCGTGGGCGCAGTGCTGGGCGTGGGGGCTGG
CGTGGGCTCTGCGCTGTTTGTCCTCGTGACCCCGGGAGAGCAGCAGAAGCAGGCGATACT
AAAGGAGATACCGGAGCAGGACCCGCAGCGCAGGGACGAGGCAGCCAGGACCAAACAGCT
ACTGCTGGCCACTCTGCAGGAGGCAGCGGCCACACAAGAGAACGTGGCTTGGAGGAAGAA
CTGGATGAGCGGCGGCGGCGGCGGGAGGTCAGCCTGAGCCCGGACCTGCTCCCGTGGGCG
CCGTGACCTCCGCTCCCACGCAGGAGTCCAAGGCAGCCTTTCTCCTTTGTGGGCCGGCAA
GGAGTCCAGACCCAGATGCCACGCGCAGGCCTCTCCGGGTCCTGGGGAGCTGCTGCTGGG
TGAGCACGTTACCCCCCGCCCCCCAAACCCTGTACTGACTGTGTTTTAACGTCTACGTTG
CGGGCCGGGGCGTCGGATGCGGCTTAACTGAAGGAACCAATAAATCATGTTCCTTCATCC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAGAGTGTTTTGGGGGTCGGTGC
TGCGAGCCCGAAAGACTGCAACTTCCGCCTGCCCCGCCCCCCATGTGAAGCTGAAGCCCA
ATAGGCAGAGCAACCACGTTTTCAAAACACCACTCAGGTCATGTGGTCTGTGTGGAGTGT
TCTTTGGGGATAACCAAGTGACATTCTTGAAATCATAGGTATCCTGGAAACTCGTGTGCA
GTAAATGCCCGTAGAGGACACCTTGGGCTACTTTCCTTTGAATGAGGTTGGTGAGGGGAG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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fce (0.543183) |
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nep (0.36785) |
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cag (0.302389) |
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fcc (0.197785) |
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col (0.195008) |
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sto (0.179824) |
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ton (0.1755) |
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fhi (0.169578) |
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hyp (0.142837) |
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che (0.136314) |
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cov (0.132153) |
|
ese (0.126502) |
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ebs (0.118301) |
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jca (0.11396) |
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eje (0.0988338) |
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fce (0.543183) |
|
nep (0.36785) |
|
cag (0.302389) |
|
fcc (0.197785) |
|
col (0.195008) |
|
sto (0.179824) |
|
ton (0.1755) |
|
fhi (0.169578) |
|
hyp (0.142837) |
|
che (0.136314) |
|
cov (0.132153) |
|
ese (0.126502) |
|
ebs (0.118301) |
|
jca (0.11396) |
|
eje (0.0988338) |