Ss1.1-rfce13c_c13.5
|
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGGAAAATACAGTTGATATCTTCCTCCTAAGCTCTTCC
AGTCACCGAGTATTTATGTGGCTACTTTGTCCAAGGCACAAAATGCCATGGCAGTTATCT
AATTAAAAACCTGCAAAACTGCTTGATAACAGTTTCGAGTGTGAGACATTTATGTAATTT
AAATGTAAGGTACAAGTTTTAATTTCTGAGTTTCTTCTATTATATTTTTATTAGAAAGAA
AATAATTTTCAGATTGAATTGAATTGGAATAAAAGAATACTTCCCACTAGAATTATATAT
CCTGAAAAATTGTATTTTTGTTATATAAACAACTTTTAAAGAAAAATCATTATCCTTTTC
TCTACCTAAATATATGGGGAGTCTTGGTATAATGACAAATATTTATCATTTTTAAATTAA
TGGTACTTGCTGGATCCACACTAACATCTTTACTAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGGAAAATACAGTTGATATCTTCCTCCTAAGCTCTTCC
AGTCACCGAGTATTTATGTGGCTACTTTGTCCAAGGCACAAAATGCCATGGCAGTTATCT
AATTAAAAACCTGCAAAACTGCTTGATAACAGTTTCGAGTGTGAGACATTTATGTAATTT
AAATGTAAGGTACAAGTTTTAATTTCTGAGTTTCTTCTATTATATTTTTATTAGAAAGAA
AATAATTTTCAGATTGAATTGAATTGGAATAAAAGAATACTTCCCACTAGAATTATATAT
CCTGAAAAATTGTATTTTTGTTATATAAACAACTTTTAAAGAAAAATCATTATCCTTTTC
TCTACCTAAATATATGGGGAGTCTTGGTATAATGACAAATATTTATCATTTTTAAATTAA
TGGTACTTGCTGGATCCACACTAACATCTTTACTAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
83-516, gnl|bosTau2|chr27 (12085096-12084665) |
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83-516, gnl|canFam2|chr16 (11282557-11281901) |
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83-516, gnl|echTel1|scaffold_162609 (4688-5255) |
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83-516, gnl|galGal2|chr1 (53612442-53613113) |
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83-516, gnl|hg17|chr7 (139878058-139878709) |
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83-516, gnl|Hg17|chr7 (139878660-139878233) |
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83-516, gnl|loxAfr1|scaffold_22792 (33426-34069) |
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83-516, gnl|mm7|chr6 (39538996-39539642) |
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83-516, gnl|Mm7|chr6 (39539597-39539171) |
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83-516, gnl|monDom2|scaffold_22 (1407645-1406962) |
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83-516, gnl|oryCun1|scaffold_147358 (15280-15920) |
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83-516, gnl|panTro1|chr6 (142637690-142638341) |
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83-516, gnl|rheMac2|chr3 (178205840-178206484) |
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83-516, gnl|rn3|chr4 (67392756-67393408) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
83-516, gnl|bosTau2|chr27 (12085096-12084665) |
|
83-516, gnl|canFam2|chr16 (11282557-11281901) |
|
83-516, gnl|echTel1|scaffold_162609 (4688-5255) |
|
83-516, gnl|galGal2|chr1 (53612442-53613113) |
|
83-516, gnl|hg17|chr7 (139878058-139878709) |
|
83-516, gnl|Hg17|chr7 (139878660-139878233) |
|
83-516, gnl|loxAfr1|scaffold_22792 (33426-34069) |
|
83-516, gnl|mm7|chr6 (39538996-39539642) |
|
83-516, gnl|Mm7|chr6 (39539597-39539171) |
|
83-516, gnl|monDom2|scaffold_22 (1407645-1406962) |
|
83-516, gnl|oryCun1|scaffold_147358 (15280-15920) |
|
83-516, gnl|panTro1|chr6 (142637690-142638341) |
|
83-516, gnl|rheMac2|chr3 (178205840-178206484) |
|
83-516, gnl|rn3|chr4 (67392756-67393408) |
|
fce (0.271592) |
|
fco (0.157208) |
|
fce (0.271592) |
|
fco (0.157208) |