Ss1.1-rfce13c_i9.5
|
CAGAGCCCCCTCCCACCCGGGAGGGGTGCGTGGGTGGCAGCCCCAACTGCTGTGCCGGGC
GGCGACCAGGGCCTCTTGTGTGGGATTTTTTTCTTTAACCATAATGGTTGTGTGCCACCC
CACTTTATATTTGTTTAATATGATATATCTCTCCGAGTAATTTTGTTAAGACCAACCCCC
CCCCCACGGGTTCCCCTCCTGGCCCTTGCACCCTCCCCTCCAACGTGATTCAGCGTCCAG
ACCGGGGAACTGAGGCCTGAACCGCTAGGCATTCTCCAACCTCTCTAGGGCCATGGCTGT
ATGTGCTGTCGCTGTGTTTCTGTTTTGGGGGGAGTTTTTTGGTTTTGTTTTTTTTTTTTT
TTCTTTCTTTTTAAACTGGGTTTGGGGTTTGATTTTTATTTCTCTGGGGCCTTTATTTTT
CTTGGCAGATACTAAAAATCTCGTCAATGTAATTTCTGTGGTTTCTATTCAGCCTGGGTC
TCATGTTTTAAAATAAACAAATTTTAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAGAGCCCCCTCCCACCCGGGAGGGGTGCGTGGGTGGCAGCCCCAACTGCTGTGCCGGGC
GGCGACCAGGGCCTCTTGTGTGGGATTTTTTTCTTTAACCATAATGGTTGTGTGCCACCC
CACTTTATATTTGTTTAATATGATATATCTCTCCGAGTAATTTTGTTAAGACCAACCCCC
CCCCCACGGGTTCCCCTCCTGGCCCTTGCACCCTCCCCTCCAACGTGATTCAGCGTCCAG
ACCGGGGAACTGAGGCCTGAACCGCTAGGCATTCTCCAACCTCTCTAGGGCCATGGCTGT
ATGTGCTGTCGCTGTGTTTCTGTTTTGGGGGGAGTTTTTTGGTTTTGTTTTTTTTTTTTT
TTCTTTCTTTTTAAACTGGGTTTGGGGTTTGATTTTTATTTCTCTGGGGCCTTTATTTTT
CTTGGCAGATACTAAAAATCTCGTCAATGTAATTTCTGTGGTTTCTATTCAGCCTGGGTC
TCATGTTTTAAAATAAACAAATTTTAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-511, gnl|bosTau2|chr25 (39062369-39062847) |
|
1-511, gnl|canFam2|chr6 (17634101-17634634) |
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1-511, gnl|hg17|chr7 (2477134-2477690) |
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1-511, gnl|Hg17|chr7 (2477182-2477674) |
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1-511, gnl|mm7|chr5 (139591989-139591525) |
|
1-511, gnl|monDom2|scaffold_17 (602053-601430) |
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1-511, gnl|oryCun1|scaffold_198276 (162212-161802) |
|
1-511, gnl|panTro1|chr6 (2683155-2683718) |
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1-511, gnl|rheMac2|chr3 (40546970-40546409) |
|
1-511, gnl|rn3|chr12 (14521416-14521889) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-511, gnl|bosTau2|chr25 (39062369-39062847) |
|
1-511, gnl|canFam2|chr6 (17634101-17634634) |
|
1-511, gnl|hg17|chr7 (2477134-2477690) |
|
1-511, gnl|Hg17|chr7 (2477182-2477674) |
|
1-511, gnl|mm7|chr5 (139591989-139591525) |
|
1-511, gnl|monDom2|scaffold_17 (602053-601430) |
|
1-511, gnl|oryCun1|scaffold_198276 (162212-161802) |
|
1-511, gnl|panTro1|chr6 (2683155-2683718) |
|
1-511, gnl|rheMac2|chr3 (40546970-40546409) |
|
1-511, gnl|rn3|chr12 (14521416-14521889) |
|
fce (0.271592) |
|
ecc (0.23007) |
|
nbm (0.198649) |
|
fcc (0.197785) |
|
ill (0.175593) |
|
duo (0.172801) |
|
mcp (0.170648) |
|
eye (0.170503) |
|
cag (0.151194) |
|
pty (0.142714) |
|
ese (0.126502) |
|
eep (0.122564) |
|
eru (0.120048) |
|
ebs (0.118301) |
|
med (0.116252) |
|
fce (0.271592) |
|
ecc (0.23007) |
|
nbm (0.198649) |
|
fcc (0.197785) |
|
ill (0.175593) |
|
duo (0.172801) |
|
mcp (0.170648) |
|
eye (0.170503) |
|
cag (0.151194) |
|
pty (0.142714) |
|
ese (0.126502) |
|
eep (0.122564) |
|
eru (0.120048) |
|
ebs (0.118301) |
|
med (0.116252) |