Non-Coding RNA Search

Ss1.1-rfce22c_a4.5

Sequence:


               
               GAGGGAAGATGTGAGATAGAGATATACACAGTGGACTACTCTCAGCCCTAAAAATGTCAT
TCACAGCAACATGGATGGACCAAGAGATTATCATACTAAATGAAGTCAGAAAAAGACAAA
TATCATATGACATCACGTCTATGTGAAGTTCAAAAAAATGATACAAATGAGCTTATTTAC
AAAACAGAAAGACTCAATAGCCATACAAAACAAACTTAGGGACACCAAAGGAGAAAGGGG
GGAAGAGGGATAAATTATAGTTTTGGATTAGCAGATACAAACTACTGTATATAAACAGAT
AAACAGCAAGGAATTACTGTGTAACAACTAAATTCAGTATCTTGTAATAAATCATAATGG
AAGAGATTATATAACTGAGTCACTTAGCTGTATACCAGAAACTAATGCAACACTGTAAAT
CAACTCTACTTCAATAAAGTTTTTTTCATATTTTTAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGGAAGATGTGAGATAGAGATATACACAGTGGACTACTCTCAGCCCTAAAAATGTCAT
TCACAGCAACATGGATGGACCAAGAGATTATCATACTAAATGAAGTCAGAAAAAGACAAA
TATCATATGACATCACGTCTATGTGAAGTTCAAAAAAATGATACAAATGAGCTTATTTAC
AAAACAGAAAGACTCAATAGCCATACAAAACAAACTTAGGGACACCAAAGGAGAAAGGGG
GGAAGAGGGATAAATTATAGTTTTGGATTAGCAGATACAAACTACTGTATATAAACAGAT
AAACAGCAAGGAATTACTGTGTAACAACTAAATTCAGTATCTTGTAATAAATCATAATGG
AAGAGATTATATAACTGAGTCACTTAGCTGTATACCAGAAACTAATGCAACACTGTAAAT
CAACTCTACTTCAATAAAGTTTTTTTCATATTTTTAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               2-438, gnl|bosTau2|chr1 (72012081-72011618)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-438, gnl|bosTau2|chr1 (72012081-72011618)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               vin (0.332557)
               

               
               fce (0.271592)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               fce (0.271592)