Non-Coding RNA Search

Ss1.1-rfce22c_k24.5

Sequence:


               
               CAGGGACCCGGCAAGAACGGGAGCTGGGGACGGGTGCCTGGGGTTCACTCCGCCCCTCGG
CCCTTCAGAGCCGCCTCTTGTGCTCCTGTCCTCCCATCCCCCTCTGCCGCTGTGGGGCTG
AGGTCTGGGGCGCATCCTGGCTTCCCTCCCTGACCAGGCCCTGGGGGTGGGGGTGGGGGC
ACAGCGGGGGGCTGGTGCCCACACCCTGCCTGCCTGGGGGGGCACATGTGCTGGTTTCAG
TGCACTTTTCTGCTTGTGATGCCGTCTCTGTGCGCCTCCTTCATCCTGGTCCCAGCTTTA
TGGAACGCCATGTTTTTAGCATGTTTTTAAATAAAAATTGATAACGTGTCAAAATGCACA
AGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGGAGAGACC
TAGTCTCGAGTTTTTTTTTTTTTTTTTTTTCCCAGCTGAGGATTTATTGGCGTAAATGCA
ACCATATAAAAACATAAGTTATGAAAAACACAGTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGGACCCGGCAAGAACGGGAGCTGGGGACGGGTGCCTGGGGTTCACTCCGCCCCTCGG
CCCTTCAGAGCCGCCTCTTGTGCTCCTGTCCTCCCATCCCCCTCTGCCGCTGTGGGGCTG
AGGTCTGGGGCGCATCCTGGCTTCCCTCCCTGACCAGGCCCTGGGGGTGGGGGTGGGGGC
ACAGCGGGGGGCTGGTGCCCACACCCTGCCTGCCTGGGGGGGCACATGTGCTGGTTTCAG
TGCACTTTTCTGCTTGTGATGCCGTCTCTGTGCGCCTCCTTCATCCTGGTCCCAGCTTTA
TGGAACGCCATGTTTTTAGCATGTTTTTAAATAAAAATTGATAACGTGTCAAAATGCACA
AGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGGAGAGACC
TAGTCTCGAGTTTTTTTTTTTTTTTTTTTTCCCAGCTGAGGATTTATTGGCGTAAATGCA
ACCATATAAAAACATAAGTTATGAAAAACACAGTCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               61-360, gnl|bosTau2|chr5 (64474970-64474667)
               

               
               61-360, gnl|Hg17|chr12 (3265628-3265988)
               

               
               61-360, gnl|Mm7|chr6 (127984932-127984636)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               61-360, gnl|bosTau2|chr5 (64474970-64474667)
               

               
               61-360, gnl|Hg17|chr12 (3265628-3265988)
               

               
               61-360, gnl|Mm7|chr6 (127984932-127984636)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fce (0.271592)
               

               
               fhi (0.169578)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               fhi (0.169578)

	61-360, gnl\|bosTau2\|chr5 (64474970-64474667)
	61-360, gnl\|Hg17\|chr12 (3265628-3265988)
	61-360, gnl\|Mm7\|chr6 (127984932-127984636)