Non-Coding RNA Search

Ss1.1-rfce23c_o23.5

Sequence:


               
               GCCCTATATTCATGGCAGAAAATGACCAAATCCTGTGTATTTGTTTTATATATTTAATAA
CTGTTTTAAATGGAAGTTTTAGTAAAAAAAAAAATCAAATTGCTATTGCTGTAGTAAGAG
AAGCTCTTTGTATCTGAACATAGTATTTCAAGTTTGTTGTTTTTTTTAATTTATTTAAAA
AGGGGGGCATGGGAATGATTTAACATCGATATATTGTTACTGCTGAAGATGAACTTTATG
ACCCTTTTCCAAGACGATCTATCCAGTGACGTGGACAGATGGGCGTTTCTTCTTGTACTT
CTGTGGTTTTTTTGGCTTTTAATACAGACTTTTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCTATATTCATGGCAGAAAATGACCAAATCCTGTGTATTTGTTTTATATATTTAATAA
CTGTTTTAAATGGAAGTTTTAGTAAAAAAAAAAATCAAATTGCTATTGCTGTAGTAAGAG
AAGCTCTTTGTATCTGAACATAGTATTTCAAGTTTGTTGTTTTTTTTAATTTATTTAAAA
AGGGGGGCATGGGAATGATTTAACATCGATATATTGTTACTGCTGAAGATGAACTTTATG
ACCCTTTTCCAAGACGATCTATCCAGTGACGTGGACAGATGGGCGTTTCTTCTTGTACTT
CTGTGGTTTTTTTGGCTTTTAATACAGACTTTTTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               17-336, gnl|bosTau2|chr22 (43746984-43746671)
               

               
               17-336, gnl|Hg17|chr3 (45241302-45240966)
               

               
               17-336, gnl|Mm7|chr9 (122964796-122964459)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-336, gnl|bosTau2|chr22 (43746984-43746671)
               

               
               17-336, gnl|Hg17|chr3 (45241302-45240966)
               

               
               17-336, gnl|Mm7|chr9 (122964796-122964459)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fhi (0.339155)
               

               
               fce (0.271592)
               

               
               cbe (0.239234)
               

               
               sto (0.179824)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.339155)
               

               
               fce (0.271592)
               

               
               cbe (0.239234)
               

               
               sto (0.179824)

	17-336, gnl\|bosTau2\|chr22 (43746984-43746671)
	17-336, gnl\|Hg17\|chr3 (45241302-45240966)
	17-336, gnl\|Mm7\|chr9 (122964796-122964459)