Non-Coding RNA Search

Ss1.1-rfce24c_f1.5

Sequence:


               
               CTGCAGGCTTTACTTTGTCAAATACACAGAATTTGTATACTGTGCCAAATTATGTCAAGT
ACTTGGATGCTCAAAAATGGGCTGACAAATAGTTTAATTACTATTGGATATACTTAATCC
TTCTGAGAGGTAGAAGATGAAGAATCATTTATTTTTCCAAAATAACATTTCATATTTTAG
CAATAAAATATTCACTTTGAGAGGCCATTTTTATTTCACTTGAGGAAACTAAGCTATAAT
GCCTTTTTCCTTTAGTTTTGTACATCCAAAACAAATTTTAAAAATTTCCTACTACAATTT
TTAATACTACAGCTAGACAGGTGTTAAGGTTTTCAAATAATGTTGATTCCTCAATAGGAC
ACTGGTCATGTTCTAACATGTACAAATAAGATATTCTTTGTTTTTAGGTAAACTGTTCCA
TATTTTCAGTTGTAAATGATCGTCTATAACTGAATCATATGTGATACTATAATGGAATGG
ATTCATTTTGTATGATGTCAGATGTAAGTAAATATGTGTAGCATTTATGTGGTGTGGTAG
TTTCCCATGGCTCTTGCTCCTGCAAAAGTAACCTATAGGAACATGACAGGAACAAGCCCT
GTTTGCTCACGCTTGCTGAAGTCCAGCGGATGTAGTAGTTGTTAAAAAAAAAAAAAAATG
GAAGGCTCCTTACAAACTCTATTTGTATTCTGCAAAAACACTTGCTTAAACAGATCCCAA
TTTCAGAAGTTATACAGGACAATTTGGTAAAACCGACATAATTGTGATTTATTAACATGA
ATTAAAATGCCCAACCAGTGCTTCAATGTGACAGTATATTTAAAATAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGGCTTTACTTTGTCAAATACACAGAATTTGTATACTGTGCCAAATTATGTCAAGT
ACTTGGATGCTCAAAAATGGGCTGACAAATAGTTTAATTACTATTGGATATACTTAATCC
TTCTGAGAGGTAGAAGATGAAGAATCATTTATTTTTCCAAAATAACATTTCATATTTTAG
CAATAAAATATTCACTTTGAGAGGCCATTTTTATTTCACTTGAGGAAACTAAGCTATAAT
GCCTTTTTCCTTTAGTTTTGTACATCCAAAACAAATTTTAAAAATTTCCTACTACAATTT
TTAATACTACAGCTAGACAGGTGTTAAGGTTTTCAAATAATGTTGATTCCTCAATAGGAC
ACTGGTCATGTTCTAACATGTACAAATAAGATATTCTTTGTTTTTAGGTAAACTGTTCCA
TATTTTCAGTTGTAAATGATCGTCTATAACTGAATCATATGTGATACTATAATGGAATGG
ATTCATTTTGTATGATGTCAGATGTAAGTAAATATGTGTAGCATTTATGTGGTGTGGTAG
TTTCCCATGGCTCTTGCTCCTGCAAAAGTAACCTATAGGAACATGACAGGAACAAGCCCT
GTTTGCTCACGCTTGCTGAAGTCCAGCGGATGTAGTAGTTGTTAAAAAAAAAAAAAAATG
GAAGGCTCCTTACAAACTCTATTTGTATTCTGCAAAAACACTTGCTTAAACAGATCCCAA
TTTCAGAAGTTATACAGGACAATTTGGTAAAACCGACATAATTGTGATTTATTAACATGA
ATTAAAATGCCCAACCAGTGCTTCAATGTGACAGTATATTTAAAATAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               14-839, gnl|bosTau2|chr4 (22271551-22270734)
               

               
               14-839, gnl|Mm7|chr5 (22545011-22544223)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-839, gnl|bosTau2|chr4 (22271551-22270734)
               

               
               14-839, gnl|Mm7|chr5 (22545011-22544223)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fce (0.271592)
               

               
               lyg (0.133103)
               

               
               pgl (0.118483)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               lyg (0.133103)
               

               
               pgl (0.118483)

	14-839, gnl\|bosTau2\|chr4 (22271551-22270734)
	14-839, gnl\|Mm7\|chr5 (22545011-22544223)