Ss1.1-rfce27c_f14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTTTTTTCTTTTTTTTCTTTTTTTCTTTTCTCTTGCAACTCTTTCTCTATCCGCTTTTT TTTTTCTTTTCTTTTTTTTTTTTTTTCTTTTTCCTCTCTGGCCCCCCGGCCCTCTTCTCT CAGCCCGCGCGCCCTTCAGTAGGTGAAGACCAGGTTGGAGATGCTGGACTCGAGCCAGTC TCCCGAGATCATTTCGCTCACCTCGGGCGTGCAGTAGTCCGGGAACTCGAAGTGCGAGCC GGAGCCGGGCTCGAAGTTAAAATCCAGGTCCCGGTCCAGCGCCGACGACGAGCTGAAGCT GCCCAGGGACATGCTCTCAAAGTTTGAGCTGGGGTTCAGGTCGAGCAGGTCGTCTTCGAA CTCGTCGTCGGAGGACGACGAGCCCGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGTGGGA CGAGGCCGAGGAGGACGCGTGCGAGGGCGCGCTGGACGGGGCGGGCGAGGCGGCGCGCAG GCTGGCGTAGCTACGGTGGTCGGCGGGCGAGCGGCCGGCGGTGGGCGACGAGGCGGCGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTTTTTTCTTTTTTTTCTTTTTTTCTTTTCTCTTGCAACTCTTTCTCTATCCGCTTTTT TTTTTCTTTTCTTTTTTTTTTTTTTTCTTTTTCCTCTCTGGCCCCCCGGCCCTCTTCTCT CAGCCCGCGCGCCCTTCAGTAGGTGAAGACCAGGTTGGAGATGCTGGACTCGAGCCAGTC TCCCGAGATCATTTCGCTCACCTCGGGCGTGCAGTAGTCCGGGAACTCGAAGTGCGAGCC GGAGCCGGGCTCGAAGTTAAAATCCAGGTCCCGGTCCAGCGCCGACGACGAGCTGAAGCT GCCCAGGGACATGCTCTCAAAGTTTGAGCTGGGGTTCAGGTCGAGCAGGTCGTCTTCGAA CTCGTCGTCGGAGGACGACGAGCCCGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGTGGGA CGAGGCCGAGGAGGACGCGTGCGAGGGCGCGCTGGACGGGGCGGGCGAGGCGGCGCGCAG GCTGGCGTAGCTACGGTGGTCGGCGGGCGAGCGGCCGGCGGTGGGCGACGAGGCGGCGCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 115-232, - strand, RNAz p=0.891752 | |
| 273-463, + strand, RNAz p=0.996204 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 115-232, - strand, RNAz p=0.891752 | |
| 273-463, + strand, RNAz p=0.996204 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 3-540, gnl|bosTau2|chr23 (29377801-29378363) | |
| 3-540, gnl|Hg17|chr6 (21704277-21703774) | |
| 3-540, gnl|Mm7|chr13 (28317076-28317635) | |
| 136-274, gnl|bosTau2|chr13 (41965431-41965572) | |
| 136-274, gnl|Hg17|chr20 (255516-255375) | |
| 136-274, gnl|Mm7|chr2 (152137611-152137752) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-540, gnl|bosTau2|chr23 (29377801-29378363) | |
| 3-540, gnl|Hg17|chr6 (21704277-21703774) | |
| 3-540, gnl|Mm7|chr13 (28317076-28317635) | |
| 136-274, gnl|bosTau2|chr13 (41965431-41965572) | |
| 136-274, gnl|Hg17|chr20 (255516-255375) | |
| 136-274, gnl|Mm7|chr2 (152137611-152137752) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.543183) | |
| ece (0.229305) | |
| ebs (0.118301) |