Non-Coding RNA Search

Ss1.1-rfhi4001b_p15.5

Sequence:


               
               GTGGTACATATACACAATGGAATAATTACTCAGCCATAAAAGGAATGAAATACCAGCATT
TTTAGCAACATGGATGGACCTAGAAATTATCATGCTAAGTGAAGTCAGCCATACAATGAG
ACACCAACATCAAATGCTTTCACTGACATGTGGAATCTGAAAAAAGGACAGACTGAACTT
CTTTGCAGAACAGATGCTGACTCACAGACATTGAAAAACTTATGGTCTCCGGAGGAGACA
GTTTGGGGGGTGGGGGGATGTGCTTGGGTTGTGGGATGGAAATCCTGTGAAATTGGATTG
TTATGATCATTATACAACTACAGATGTGATAAATTCATTTGAGTAATAAAAAAAAGACTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGTACATATACACAATGGAATAATTACTCAGCCATAAAAGGAATGAAATACCAGCATT
TTTAGCAACATGGATGGACCTAGAAATTATCATGCTAAGTGAAGTCAGCCATACAATGAG
ACACCAACATCAAATGCTTTCACTGACATGTGGAATCTGAAAAAAGGACAGACTGAACTT
CTTTGCAGAACAGATGCTGACTCACAGACATTGAAAAACTTATGGTCTCCGGAGGAGACA
GTTTGGGGGGTGGGGGGATGTGCTTGGGTTGTGGGATGGAAATCCTGTGAAATTGGATTG
TTATGATCATTATACAACTACAGATGTGATAAATTCATTTGAGTAATAAAAAAAAGACTA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-241, gnl|bosTau2|chr11 (53130522-53130761)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-241, gnl|bosTau2|chr11 (53130522-53130761)

Expressed library(ies): 16 entry(ies)

More info

Expressed library(ies): 16 entry(ies)

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               cte (0.58548)
               

               
               cmu (0.55918)
               

               
               sto (0.359648)
               

               
               cbe (0.239234)
               

               
               ece (0.229305)
               

               
               eje (0.197668)
               

               
               fbs (0.175346)
               

               
               fhi (0.169578)
               

               
               mga (0.160205)
               

               
               bfe (0.149858)
               

               
               lnt (0.142308)
               

               
               che (0.136314)
               

               
               lyg (0.133103)
               

               
               kid (0.129735)
               

               
               ebs (0.118301)
               

               
               cbl (0.114797)

Expressed library(ies): 16 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.58548)
               

               
               cmu (0.55918)
               

               
               sto (0.359648)
               

               
               cbe (0.239234)
               

               
               ece (0.229305)
               

               
               eje (0.197668)
               

               
               fbs (0.175346)
               

               
               fhi (0.169578)
               

               
               mga (0.160205)
               

               
               bfe (0.149858)
               

               
               lnt (0.142308)
               

               
               che (0.136314)
               

               
               lyg (0.133103)
               

               
               kid (0.129735)
               

               
               ebs (0.118301)
               

               
               cbl (0.114797)

	cte (0.58548)
	cmu (0.55918)
	sto (0.359648)
	cbe (0.239234)
	ece (0.229305)
	eje (0.197668)
	fbs (0.175346)
	fhi (0.169578)
	mga (0.160205)
	bfe (0.149858)
	lnt (0.142308)
	che (0.136314)
	lyg (0.133103)
	kid (0.129735)
	ebs (0.118301)
	cbl (0.114797)