Non-Coding RNA Search

Ss1.1-rfhi4003b_j5.5

Sequence:


               
               CCCGGCGCCCTACAAGCCCAGGCGCTCCCCACTGACGGGCCGCCGCTCGGGCCCCACCAC
AGCCCCCGAGCAGACCCGAAGGGTCACAAGGAACAGCAGCACCCAGACGGTGTCAGACAA
GAGCACTCAGACGGTGCTGCCCTACACAGCCACCAGACAGAAAGCCACCGGGAAGAACTA
GGGGCCGGGGTGGGGGCTGGGGGGCGGTGGGCACATAGAGCTATAAATATATATATATAT
ATATATGTGTGTGTATATATATATATATTTAAACAAACTCAGTCATAATAAAATTTTAAA
ATGCTAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCGGCGCCCTACAAGCCCAGGCGCTCCCCACTGACGGGCCGCCGCTCGGGCCCCACCAC
AGCCCCCGAGCAGACCCGAAGGGTCACAAGGAACAGCAGCACCCAGACGGTGTCAGACAA
GAGCACTCAGACGGTGCTGCCCTACACAGCCACCAGACAGAAAGCCACCGGGAAGAACTA
GGGGCCGGGGTGGGGGCTGGGGGGCGGTGGGCACATAGAGCTATAAATATATATATATAT
ATATATGTGTGTGTATATATATATATATTTAAACAAACTCAGTCATAATAAAATTTTAAA
ATGCTAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-243, gnl|bosTau2|chr10 (12088386-12088626)
               

               
               1-243, gnl|Hg17|chr15 (71819491-71819230)
               

               
               1-243, gnl|Mm7|chr9 (58528176-58528412)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-243, gnl|bosTau2|chr10 (12088386-12088626)
               

               
               1-243, gnl|Hg17|chr15 (71819491-71819230)
               

               
               1-243, gnl|Mm7|chr9 (58528176-58528412)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fhi (0.339155)
               

               
               mas (0.210305)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.339155)
               

               
               mas (0.210305)

	1-243, gnl\|bosTau2\|chr10 (12088386-12088626)
	1-243, gnl\|Hg17\|chr15 (71819491-71819230)
	1-243, gnl\|Mm7\|chr9 (58528176-58528412)