Non-Coding RNA Search

Ss1.1-rfhi4014b_e15.5

Sequence:


               
               GTTGGAGTCAGTATAGTCAGCACAGAAGAAAGTGGAAAGAATGTTCTGGGTCATGTTTTT
GCTAGGAAGGGGAAATGGAAGCTGCATTTCAAAGCCACTGCTTCCAATCCAGCTATAAAG
TTTGATAAGGAATGTGCTATTTTGTTTCATGACTCCACTAATTATGGATATTGGCTGCCG
AGGCATTTGTTATTTTGTTGGGTGTGGGGAAAGACCCTAGGAGAGGTTTTCTTGGTGACT
GTACCCTTCAGGGCTCTTGGAGCAGCGAGACCAAGTTTCCAAGAGCAGTCCGACGAGTTG
GGTGAACTCACTCTTTCCTGATTTGATAGGACTAATTGGGAAATCCAGCTGATCAGTGAG
TCCGACATGGGGGAAAGGATCAAAAGCTTTCAGCACTGGCCTCTGGTTCCTTTGTCCTCT
TTCCTTCTCCCTCCTCTGACTCCTGTGATGGAAGGTGATTTCATCTAAAGCCCTAGTTAC
TAAGGATGCTGTTACAGAGCTCACACAGCCAGCTTGCCCTGCCCTCTGATACTGTAACCT
ATGGCATCTGCCCCGCAGCCAGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGGAGTCAGTATAGTCAGCACAGAAGAAAGTGGAAAGAATGTTCTGGGTCATGTTTTT
GCTAGGAAGGGGAAATGGAAGCTGCATTTCAAAGCCACTGCTTCCAATCCAGCTATAAAG
TTTGATAAGGAATGTGCTATTTTGTTTCATGACTCCACTAATTATGGATATTGGCTGCCG
AGGCATTTGTTATTTTGTTGGGTGTGGGGAAAGACCCTAGGAGAGGTTTTCTTGGTGACT
GTACCCTTCAGGGCTCTTGGAGCAGCGAGACCAAGTTTCCAAGAGCAGTCCGACGAGTTG
GGTGAACTCACTCTTTCCTGATTTGATAGGACTAATTGGGAAATCCAGCTGATCAGTGAG
TCCGACATGGGGGAAAGGATCAAAAGCTTTCAGCACTGGCCTCTGGTTCCTTTGTCCTCT
TTCCTTCTCCCTCCTCTGACTCCTGTGATGGAAGGTGATTTCATCTAAAGCCCTAGTTAC
TAAGGATGCTGTTACAGAGCTCACACAGCCAGCTTGCCCTGCCCTCTGATACTGTAACCT
ATGGCATCTGCCCCGCAGCCAGAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-561, gnl|bosTau2|chr25 (33156356-33155789)
               

               
               1-561, gnl|Hg17|chr7 (99313078-99312530)
               

               
               1-561, gnl|Mm7|chr5 (137089753-137089061)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-561, gnl|bosTau2|chr25 (33156356-33155789)
               

               
               1-561, gnl|Hg17|chr7 (99313078-99312530)
               

               
               1-561, gnl|Mm7|chr5 (137089753-137089061)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fhi (0.169578)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)
               

               
               lnt (0.142308)

	1-561, gnl\|bosTau2\|chr25 (33156356-33155789)
	1-561, gnl\|Hg17\|chr7 (99313078-99312530)
	1-561, gnl\|Mm7\|chr5 (137089753-137089061)