Non-Coding RNA Search

Ss1.1-rfhi4024b_c18.5

Sequence:


               
               CCATACTCTGCCCCACCGGCAGCTGCGGCCTCTGTCTGCATTTTTCACTGACCAGCATTT
CTGGGAGATAATTACATATCAGTATGGACAGATCCACCCAATGCTTTTCAACAAGAACAA
ACCCATAATAATAGCGAGAACTTATACTTACTCTGTGCCGGCTGCTCCTCTAGGCACTTT
ATTGGTATTAACTGATTGACTCCCCTTAACAGCTTGGAGATGGACGCTCTGCTGATCTCA
TTCCGAGGGCAGGAGGCCAGGGATGACCATTGGGTGACGTGGCCTGAATGCCTCTCCTGA
CCCTCCTGCTGGACACAGAGGCCATTTCCAGGCAGTGAGCACCATGCTACTTCTATCTTT
GGGCACTTGTATCTCAGTGGACGAGTGCTGGGAAATGAATGGCTGGGTTGAAGGGCAGGT
ACATTTTGAATTTACAAAGCTATTGTCAAATTACCCTCTGAAGAGGTCACCCTCAGTTAC
AGAAGGCTACACCTGCACCTCCCGCTCCGGCAGCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCATACTCTGCCCCACCGGCAGCTGCGGCCTCTGTCTGCATTTTTCACTGACCAGCATTT
CTGGGAGATAATTACATATCAGTATGGACAGATCCACCCAATGCTTTTCAACAAGAACAA
ACCCATAATAATAGCGAGAACTTATACTTACTCTGTGCCGGCTGCTCCTCTAGGCACTTT
ATTGGTATTAACTGATTGACTCCCCTTAACAGCTTGGAGATGGACGCTCTGCTGATCTCA
TTCCGAGGGCAGGAGGCCAGGGATGACCATTGGGTGACGTGGCCTGAATGCCTCTCCTGA
CCCTCCTGCTGGACACAGAGGCCATTTCCAGGCAGTGAGCACCATGCTACTTCTATCTTT
GGGCACTTGTATCTCAGTGGACGAGTGCTGGGAAATGAATGGCTGGGTTGAAGGGCAGGT
ACATTTTGAATTTACAAAGCTATTGTCAAATTACCCTCTGAAGAGGTCACCCTCAGTTAC
AGAAGGCTACACCTGCACCTCCCGCTCCGGCAGCCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               25-516, gnl|bosTau2|chr7 (26291286-26291767)
               

               
               25-516, gnl|Hg17|chr5 (176023412-176023926)
               

               
               25-516, gnl|Mm7|chr13 (53887532-53887973)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-516, gnl|bosTau2|chr7 (26291286-26291767)
               

               
               25-516, gnl|Hg17|chr5 (176023412-176023926)
               

               
               25-516, gnl|Mm7|chr13 (53887532-53887973)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               fhi (0.169578)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               fhi (0.169578)

	25-516, gnl\|bosTau2\|chr7 (26291286-26291767)
	25-516, gnl\|Hg17\|chr5 (176023412-176023926)
	25-516, gnl\|Mm7\|chr13 (53887532-53887973)