Non-Coding RNA Search

Ss1.1-rfhi4027b_n12.5

Sequence:


               
               CTATGATGGCGCACAAATACCTCAACTGTCTGGCTTATAGAAGGGGCTGGGGTCTTTTAA
GGAGCAGCTATATTAATCCCATGTAGTTACACCATCTAATGACAAGGAGTCACATTCTAG
CTTTTCTCACTGTGGAAAAGAAATGTTTCTGTTTAATTCATATCCAAAGTTACAAAACGG
CTTGTAAATTTTACTGACTTGTGTCATTTTTGTTTAGTCCTTGAAAAGTACAGCTTGCTT
ATTTCAGATGATAACTTCTAGTGGTGTTCTCTGCTTTTTTTTTTTTTTTTTCTTTTCTTG
GTATGAACTTTGTTGTATTTGTTGAAGTTTGTATGTTTTGTGGTTTCTAATTCCCATTGG
TGCACTGTACAATGGGGTGTGTAGTGTCATGAAGAAAAATAATACACAGATACTTTATGA
AGTGTGTTTTATTTTTAAATGACTGTAGTGTTGACAATATATTGATTTATTAAGATGTGA
AGGGAAAATTCTAAATTTACCAAAATGTGTATATTTTAATAAATGCATAAAGCTTTATTG
TGTGCCTTTAAATTTAAAAATGGGTTTATAAAGCAAGTCAGAAACAAAAGTGTCTTACCA
TAAAATATCCATAGTAATGTAAATTCTTACATAGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTATGATGGCGCACAAATACCTCAACTGTCTGGCTTATAGAAGGGGCTGGGGTCTTTTAA
GGAGCAGCTATATTAATCCCATGTAGTTACACCATCTAATGACAAGGAGTCACATTCTAG
CTTTTCTCACTGTGGAAAAGAAATGTTTCTGTTTAATTCATATCCAAAGTTACAAAACGG
CTTGTAAATTTTACTGACTTGTGTCATTTTTGTTTAGTCCTTGAAAAGTACAGCTTGCTT
ATTTCAGATGATAACTTCTAGTGGTGTTCTCTGCTTTTTTTTTTTTTTTTTCTTTTCTTG
GTATGAACTTTGTTGTATTTGTTGAAGTTTGTATGTTTTGTGGTTTCTAATTCCCATTGG
TGCACTGTACAATGGGGTGTGTAGTGTCATGAAGAAAAATAATACACAGATACTTTATGA
AGTGTGTTTTATTTTTAAATGACTGTAGTGTTGACAATATATTGATTTATTAAGATGTGA
AGGGAAAATTCTAAATTTACCAAAATGTGTATATTTTAATAAATGCATAAAGCTTTATTG
TGTGCCTTTAAATTTAAAAATGGGTTTATAAAGCAAGTCAGAAACAAAAGTGTCTTACCA
TAAAATATCCATAGTAATGTAAATTCTTACATAGAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-634, gnl|bosTau2|chr1 (62610334-62610962)
               

               
               1-634, gnl|Hg17|chr3 (171660922-171660305)
               

               
               1-634, gnl|Mm7|chr3 (31015441-31014814)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-634, gnl|bosTau2|chr1 (62610334-62610962)
               

               
               1-634, gnl|Hg17|chr3 (171660922-171660305)
               

               
               1-634, gnl|Mm7|chr3 (31015441-31014814)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fhi (0.508733)
               

               
               fco (0.157208)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.508733)
               

               
               fco (0.157208)

	1-634, gnl\|bosTau2\|chr1 (62610334-62610962)
	1-634, gnl\|Hg17\|chr3 (171660922-171660305)
	1-634, gnl\|Mm7\|chr3 (31015441-31014814)