Ss1.1-rfhi4028b_n12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCCCAAACCTCCCCACCCAACGCGCCCATGTGCGTAATATCCTCCCACCCCTTCCCCGA CTCTTGTGCCAAACGGTCCCGCGGGAGCCGCTCTCCCCGTCCCCTCCCTTAGCCCCTGCC CCGAGCGGCACCGGATTCTGGGCTCCCGCTGTTCCGTGACCTCCGGCCCCCGGGCCCCCT ACGAGACCTCTGACCCTGCTGGACCCCAGAACGATCCAGGGACCCTGCCTGTGATTCTCC AGGACTCCACGACCCCAAGCCACTGCTCCCAGGACGGATATTGTGAAGCTAGTCTCCATC TCTGTGACCTTGGACCCCTACTCTTTCCACCCTATCTCCATCCCAGAGGCCCTCCCTCAG GTCCCTGGCAGAAAGACTTTTTCCCCTTCTTGCCAAAATAAAGAAGATTCTTTGTTTTTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCCCAAACCTCCCCACCCAACGCGCCCATGTGCGTAATATCCTCCCACCCCTTCCCCGA CTCTTGTGCCAAACGGTCCCGCGGGAGCCGCTCTCCCCGTCCCCTCCCTTAGCCCCTGCC CCGAGCGGCACCGGATTCTGGGCTCCCGCTGTTCCGTGACCTCCGGCCCCCGGGCCCCCT ACGAGACCTCTGACCCTGCTGGACCCCAGAACGATCCAGGGACCCTGCCTGTGATTCTCC AGGACTCCACGACCCCAAGCCACTGCTCCCAGGACGGATATTGTGAAGCTAGTCTCCATC TCTGTGACCTTGGACCCCTACTCTTTCCACCCTATCTCCATCCCAGAGGCCCTCCCTCAG GTCCCTGGCAGAAAGACTTTTTCCCCTTCTTGCCAAAATAAAGAAGATTCTTTGTTTTTA |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 70-189, - strand, RNAz p=0.609796 | |
| 298-397, - strand, RNAz p=0.961983 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 70-189, - strand, RNAz p=0.609796 | |
| 298-397, - strand, RNAz p=0.961983 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 4-404, gnl|bosTau2|chr18 (45025308-45025750) | |
| 4-404, gnl|Hg17|chr19 (47520621-47521039) | |
| 4-404, gnl|Mm7|chr7 (22103930-22104355) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-404, gnl|bosTau2|chr18 (45025308-45025750) | |
| 4-404, gnl|Hg17|chr19 (47520621-47521039) | |
| 4-404, gnl|Mm7|chr7 (22103930-22104355) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| hyp (0.285673) | |
| fbs (0.175346) | |
| fhi (0.169578) | |
| cje (0.165235) | |
| csp (0.161186) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.285673) | |
| fbs (0.175346) | |
| fhi (0.169578) | |
| cje (0.165235) | |
| csp (0.161186) |