Non-Coding RNA Search

Ss1.1-rfhi4029b_e12.5

Sequence:


               
               GGCATCTAATAACAGATGTGAGAACTGTAACGTGTGCGCTGTGTACGTGTCCTTGGCTGT
CAGCCCATTGCAGTTTCCATGTGTGTTTCTATATGCGGTATATACTAAGATAATGTAGTT
GTTTTGTCCTTTGTCCTCTCTGTGCTCTATCTCTAGTCCGGAGTGGTACAGTCCCATTCC
TGCAGTCCTAGTGAATCAGTGATTCTTGGGGGTTAGTGATTTTTGTGCGGTGGCCTTCCT
CTGTAATGTCACCCTATGCTGCTTCTACTGTCTGTGAATCTTCCGTTTCACTTTTTACGA
TTCCTGCTGTTGCTTTTGCTGGTGTATATTCTCCCAACCGCTCCCCTTTCTCTCCCTCCC
TCTATCTCTCTCTCTTTCTCTCTGTTTCCCTTTTCCCTGCCTCACCTTCCCCTCCCCACC
CCCCAACTTCTCCAAACTCTTTCTCGTTCTCAGAGATAAAAAGACTCTTAACTAGCTCAA
GGTTAATGGAGCCATTTTTCCCACAACGGAATCCTGGGTACGACTCTTTCTTCTGGAGTG
CCACACAAAGCACTGAAGAAAATGCTCAGATATATAAAATAAATTGATGCCATATAGCCT
CAGCTGTTAACATTCCCAGAGTCCCTTGTGCTCTACCTATAAGCAGTGGGTGCTTTTCTT
TGGTTTCCTTCCAGGTTGGCTGATGGAGCAATATATAAAACAATTTACCAGTGAGACAGA
AAATTATTTCAAAGGTCAACCAACATTTTTTAAAAAACAAAAGGGGAGGGGGTCATGGAC
TATAGAATTGTCATATATATTTGTTTATGTGTGCAATGCTAATATAGTAACTACGGCTGT
CCTTTGAATATCACTGTGTTGAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCATCTAATAACAGATGTGAGAACTGTAACGTGTGCGCTGTGTACGTGTCCTTGGCTGT
CAGCCCATTGCAGTTTCCATGTGTGTTTCTATATGCGGTATATACTAAGATAATGTAGTT
GTTTTGTCCTTTGTCCTCTCTGTGCTCTATCTCTAGTCCGGAGTGGTACAGTCCCATTCC
TGCAGTCCTAGTGAATCAGTGATTCTTGGGGGTTAGTGATTTTTGTGCGGTGGCCTTCCT
CTGTAATGTCACCCTATGCTGCTTCTACTGTCTGTGAATCTTCCGTTTCACTTTTTACGA
TTCCTGCTGTTGCTTTTGCTGGTGTATATTCTCCCAACCGCTCCCCTTTCTCTCCCTCCC
TCTATCTCTCTCTCTTTCTCTCTGTTTCCCTTTTCCCTGCCTCACCTTCCCCTCCCCACC
CCCCAACTTCTCCAAACTCTTTCTCGTTCTCAGAGATAAAAAGACTCTTAACTAGCTCAA
GGTTAATGGAGCCATTTTTCCCACAACGGAATCCTGGGTACGACTCTTTCTTCTGGAGTG
CCACACAAAGCACTGAAGAAAATGCTCAGATATATAAAATAAATTGATGCCATATAGCCT
CAGCTGTTAACATTCCCAGAGTCCCTTGTGCTCTACCTATAAGCAGTGGGTGCTTTTCTT
TGGTTTCCTTCCAGGTTGGCTGATGGAGCAATATATAAAACAATTTACCAGTGAGACAGA
AAATTATTTCAAAGGTCAACCAACATTTTTTAAAAAACAAAAGGGGAGGGGGTCATGGAC
TATAGAATTGTCATATATATTTGTTTATGTGTGCAATGCTAATATAGTAACTACGGCTGT
CCTTTGAATATCACTGTGTTGAGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q9BGR9_MACFA

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9BGR9_MACFA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-864, gnl|bosTau2|chr21 (29274935-29274096)
               

               
               1-864, gnl|Hg17|chr14 (33341486-33342318)
               

               
               1-864, gnl|Mm7|chr12 (52089111-52089958)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-864, gnl|bosTau2|chr21 (29274935-29274096)
               

               
               1-864, gnl|Hg17|chr14 (33341486-33342318)
               

               
               1-864, gnl|Mm7|chr12 (52089111-52089958)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fhi (0.169578)
               

               
               hyp (0.142837)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)
               

               
               hyp (0.142837)

	1-864, gnl\|bosTau2\|chr21 (29274935-29274096)
	1-864, gnl\|Hg17\|chr14 (33341486-33342318)
	1-864, gnl\|Mm7\|chr12 (52089111-52089958)