Non-Coding RNA Search

Ss1.1-rfhi4031b_g1.5

Sequence:


               
               CTATATCTTATAGAATATTTTTTGTGATCAGTAGTCAAGTTGGACTTGTTTAATTTTCTG
CTGCTTGAGTTGCCTGATGCTCAGAGCTTTTTGGTTTGGATTACTATTGCAAAAGGGAAC
TTGGTCTGGCATTAAGAATGTCCTCTTGGAGAAAATAAGAGTTTTAACACTTCTAGATCA
TAGTTCTAGATGGCGAAAATAACACAAACAACCTTTTACTCTTACGATCAATTGTTAATT
GTAATTGCATGACAAAATTTATGGAAAAGGGGTGACCTACTAGTAGAGTGTAATGGGGAA
GGGAGGATTCTTTTCTGGTTTTCCTTTGTGCAGTGAAACTTTGTGTTGCTATTGCTTTGG
CTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGAAAGATATTGATGTACCTG
CTACTGCTTTTTGAGATCATTTGTTACATTATCTTTTAAGAATAGCATCCATTTTAACGG
TTGACTTAAGGTTTGTTAATGTTGAGATGTAAAGCTGCCATCTTTATATTTTCCTGCTTC
TGATTTATTGTTGTGAGGGAAACATACAATTGTGGTTACCTTCAAATTTTGAAATTAAAA
ATATACAATTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTATATCTTATAGAATATTTTTTGTGATCAGTAGTCAAGTTGGACTTGTTTAATTTTCTG
CTGCTTGAGTTGCCTGATGCTCAGAGCTTTTTGGTTTGGATTACTATTGCAAAAGGGAAC
TTGGTCTGGCATTAAGAATGTCCTCTTGGAGAAAATAAGAGTTTTAACACTTCTAGATCA
TAGTTCTAGATGGCGAAAATAACACAAACAACCTTTTACTCTTACGATCAATTGTTAATT
GTAATTGCATGACAAAATTTATGGAAAAGGGGTGACCTACTAGTAGAGTGTAATGGGGAA
GGGAGGATTCTTTTCTGGTTTTCCTTTGTGCAGTGAAACTTTGTGTTGCTATTGCTTTGG
CTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGAAAGATATTGATGTACCTG
CTACTGCTTTTTGAGATCATTTGTTACATTATCTTTTAAGAATAGCATCCATTTTAACGG
TTGACTTAAGGTTTGTTAATGTTGAGATGTAAAGCTGCCATCTTTATATTTTCCTGCTTC
TGATTTATTGTTGTGAGGGAAACATACAATTGTGGTTACCTTCAAATTTTGAAATTAAAA
ATATACAATTGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               3-612, gnl|bosTau2|chr2 (83849897-83849287)
               

               
               3-612, gnl|Hg17|chr1 (22161992-22162597)
               

               
               3-612, gnl|Mm7|chr4 (136700811-136700212)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-612, gnl|bosTau2|chr2 (83849897-83849287)
               

               
               3-612, gnl|Hg17|chr1 (22161992-22162597)
               

               
               3-612, gnl|Mm7|chr4 (136700811-136700212)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               cbr (0.511902)
               

               
               ece (0.229305)
               

               
               fhi (0.169578)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbr (0.511902)
               

               
               ece (0.229305)
               

               
               fhi (0.169578)

	3-612, gnl\|bosTau2\|chr2 (83849897-83849287)
	3-612, gnl\|Hg17\|chr1 (22161992-22162597)
	3-612, gnl\|Mm7\|chr4 (136700811-136700212)