Non-Coding RNA Search

Ss1.1-rfli704b_f1.5

Sequence:


               
               CTTAGGTGATTGTCAACAAGATGTGATTATTCTTTCCTGTTTTGTGAGGTAAGATTGGTT
TTGAGAGTACGTATCAGTTAAGAACAGTATTTTATTGAAATCACTAGTTATTGTGTCTAT
CAACTCTGAAATCAAGTGCCAGCAAAGAATTTTAAATCTTTCAGTTGTGTACAGAACTGT
TTTGTGTAGCATTGAGATACTCTGTCAGTTTTGTAGGTTGCTAAATGTTATTATCAGCTT
AAAGGTATTTTTCTATTAAAAAGTTTACAGTTAAATAACACAAGTGGATGATAGCATTTG
GGGCCCGTAGTGAAAGTATATTTCGTCTAAAAGATTTCTCTATGCAGTGGTGTACATGGC
TATTTTATTATGGTATTTGTATCTGTTCTGTGTTTCTCTGAACCAAGCTCCAGTCTTTGT
TTCTCTCAGCATATGTAAGGGAAAGAAGGTCCAGAAATAGAGAAAAAGTCACACAAAGCT
GACATTGCTAAAGACAGGAAGACTTACGTGCTTACCTTTTGAGGGTTTATTAGCTAAGAG
TTGTCATGATAACCTGTCCGTGAGGGTTTATCAGGTAGAGTTGTCATGATACCCTGTACA
TCATAAGTGACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTAGGTGATTGTCAACAAGATGTGATTATTCTTTCCTGTTTTGTGAGGTAAGATTGGTT
TTGAGAGTACGTATCAGTTAAGAACAGTATTTTATTGAAATCACTAGTTATTGTGTCTAT
CAACTCTGAAATCAAGTGCCAGCAAAGAATTTTAAATCTTTCAGTTGTGTACAGAACTGT
TTTGTGTAGCATTGAGATACTCTGTCAGTTTTGTAGGTTGCTAAATGTTATTATCAGCTT
AAAGGTATTTTTCTATTAAAAAGTTTACAGTTAAATAACACAAGTGGATGATAGCATTTG
GGGCCCGTAGTGAAAGTATATTTCGTCTAAAAGATTTCTCTATGCAGTGGTGTACATGGC
TATTTTATTATGGTATTTGTATCTGTTCTGTGTTTCTCTGAACCAAGCTCCAGTCTTTGT
TTCTCTCAGCATATGTAAGGGAAAGAAGGTCCAGAAATAGAGAAAAAGTCACACAAAGCT
GACATTGCTAAAGACAGGAAGACTTACGTGCTTACCTTTTGAGGGTTTATTAGCTAAGAG
TTGTCATGATAACCTGTCCGTGAGGGTTTATCAGGTAGAGTTGTCATGATACCCTGTACA
TCATAAGTGACC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-551, gnl|bosTau2|chr12 (3029443-3028902)
               

               
               10-551, gnl|Hg17|chr13 (40601356-40600481)
               

               
               10-551, gnl|Mm7|chr14 (74110437-74110968)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-551, gnl|bosTau2|chr12 (3029443-3028902)
               

               
               10-551, gnl|Hg17|chr13 (40601356-40600481)
               

               
               10-551, gnl|Mm7|chr14 (74110437-74110968)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fli (0.202881)
               

               
               fcc (0.197785)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)
               

               
               fcc (0.197785)
               

               
               cty (0.10408)

	10-551, gnl\|bosTau2\|chr12 (3029443-3028902)
	10-551, gnl\|Hg17\|chr13 (40601356-40600481)
	10-551, gnl\|Mm7\|chr14 (74110437-74110968)