Ss1.1-rfli717b_h20.5.5
|
TTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTGAAGCTTGATGAATCTTTATTAAGCAGGG
GCCCACCAAGAGGGCAGCTAAGGCTGGGGGAGGCGGGGGAGTTGGGCAGGAACGGGGCCC
CGAAGGGGGTGCCCGGATGAGAGGGCACTCACTGATTATCACTGGGCGCAGAGGTGGAGG
AGCTGATGCTCACGGCCGACTGCATCCTCTCCACCAGCCCGGCCCACTGGCGCCGCATGT
CTTCCACCAGAGGCTCGAACCAGCCTTTGAGGCGGGCCTGGAAGGCCTCGGCCTGCAGGC
GCAACTGGCTGCCCTGCTCCTCCACTTTGGTGCGCACCTCCTCCAGCTGCTCACGCATCT
CATCCAGGCGGTCGCGGGTCCGGCTGCCCATCTCCTCCAGCCGTCCGCGCAGCTTCTGGC
CCCAGGCTTCGGCGCGCTCGCGCAGCGGCTGGCCGGCCCTGGTACTCAGGGTGGCGGCGC
GCAATCGGCCCTGCTCCACCAGGGGCCCGAGGCGCTCGCGGAGGGCGCTCACGCTGCGCT
CGGCGCCCTCGCGCAGCCCCGCCTGGTACACGGCCAGGCGCTTCTGCAGGTCCTCGGTGT
CGCGGAGCAGCCGCTTGCGCAGCTTGCGCAGGTGGGAAGCCAGGCGGCTCCGCAGCTCCT
CGGTGGTCTGGCCCAACATGTTGTGCACCTCGCTGCGGTAGAGCACCAAGCGGTTGCGCA
CGTCCTCCATGTCGGCGCCCACGCGGGCCTGCGCCGCCTGCAGCTCCTTGGACAGGCGCG
CCTGCGTCTCCTGGGTCACGGGGCCCAGCTGCGCCTCCAGCTCCTCGCGGTAGGCCTTCA
CCTCCTTCATGCTCTCCTCTATCAGCTCCGTCAGTTCCTGGGTGACCTTGGTGCTGAGCA
GCTCCTCCTGCACTTGGTCAGACAGGGACTGCACCCAGCGCAGGTAATCCCAGAAGCGGC
CCAGGGCCTGCTCCCAGGGCTGGCTGCCCTGCCACTTGGGCTCCTCCCACCACACGTGCA
CCTCCGGCGGCGGCCCCGGCTCATCCTCTGTCCGGCATCCTGCGAGGAGGGTTACCACCA
AAGCAACCCACAGAACCCTCATCTTCTGGCTTGCGATTGGCCAACCGGTTGCTTCCTCCT
CCTCCTTCCTCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTGAAGCTTGATGAATCTTTATTAAGCAGGG
GCCCACCAAGAGGGCAGCTAAGGCTGGGGGAGGCGGGGGAGTTGGGCAGGAACGGGGCCC
CGAAGGGGGTGCCCGGATGAGAGGGCACTCACTGATTATCACTGGGCGCAGAGGTGGAGG
AGCTGATGCTCACGGCCGACTGCATCCTCTCCACCAGCCCGGCCCACTGGCGCCGCATGT
CTTCCACCAGAGGCTCGAACCAGCCTTTGAGGCGGGCCTGGAAGGCCTCGGCCTGCAGGC
GCAACTGGCTGCCCTGCTCCTCCACTTTGGTGCGCACCTCCTCCAGCTGCTCACGCATCT
CATCCAGGCGGTCGCGGGTCCGGCTGCCCATCTCCTCCAGCCGTCCGCGCAGCTTCTGGC
CCCAGGCTTCGGCGCGCTCGCGCAGCGGCTGGCCGGCCCTGGTACTCAGGGTGGCGGCGC
GCAATCGGCCCTGCTCCACCAGGGGCCCGAGGCGCTCGCGGAGGGCGCTCACGCTGCGCT
CGGCGCCCTCGCGCAGCCCCGCCTGGTACACGGCCAGGCGCTTCTGCAGGTCCTCGGTGT
CGCGGAGCAGCCGCTTGCGCAGCTTGCGCAGGTGGGAAGCCAGGCGGCTCCGCAGCTCCT
CGGTGGTCTGGCCCAACATGTTGTGCACCTCGCTGCGGTAGAGCACCAAGCGGTTGCGCA
CGTCCTCCATGTCGGCGCCCACGCGGGCCTGCGCCGCCTGCAGCTCCTTGGACAGGCGCG
CCTGCGTCTCCTGGGTCACGGGGCCCAGCTGCGCCTCCAGCTCCTCGCGGTAGGCCTTCA
CCTCCTTCATGCTCTCCTCTATCAGCTCCGTCAGTTCCTGGGTGACCTTGGTGCTGAGCA
GCTCCTCCTGCACTTGGTCAGACAGGGACTGCACCCAGCGCAGGTAATCCCAGAAGCGGC
CCAGGGCCTGCTCCCAGGGCTGGCTGCCCTGCCACTTGGGCTCCTCCCACCACACGTGCA
CCTCCGGCGGCGGCCCCGGCTCATCCTCTGTCCGGCATCCTGCGAGGAGGGTTACCACCA
AAGCAACCCACAGAACCCTCATCTTCTGGCTTGCGATTGGCCAACCGGTTGCTTCCTCCT
CCTCCTTCCTCC
|
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
cli (13.1418) |
|
amn (4.59482) |
|
clu (3.94831) |
|
hyp (3.42808) |
|
fce (2.44432) |
|
fli (2.23169) |
|
fhi (2.20451) |
|
lnt (1.7077) |
|
cag (1.66314) |
|
fbs (1.22742) |
|
cly (1.20642) |
|
ute (1.19506) |
|
ebs (1.18301) |
|
med (1.16252) |
|
eru (0.960384) |
|
jca (0.683761) |
|
mcp (0.682594) |
|
eep (0.61282) |
|
eli (0.607257) |
|
nep (0.551775) |
|
ill (0.526778) |
|
eye (0.511509) |
|
nje (0.49776) |
|
cty (0.41632) |
|
fcc (0.39557) |
|
eje (0.395335) |
|
col (0.390016) |
|
elu (0.385356) |
|
cbr (0.383926) |
|
nco (0.323468) |
|
nca (0.273748) |
|
cov (0.264306) |
|
ece (0.229305) |
|
jej (0.197844) |
|
csp (0.161186) |
|
lun (0.150489) |
|
ese (0.126502) |
|
pgl (0.118483) |
|
ecc (0.115035) |
|
nbm (0.0993246) |
|
cli (13.1418) |
|
amn (4.59482) |
|
clu (3.94831) |
|
hyp (3.42808) |
|
fce (2.44432) |
|
fli (2.23169) |
|
fhi (2.20451) |
|
lnt (1.7077) |
|
cag (1.66314) |
|
fbs (1.22742) |
|
cly (1.20642) |
|
ute (1.19506) |
|
ebs (1.18301) |
|
med (1.16252) |
|
eru (0.960384) |
|
jca (0.683761) |
|
mcp (0.682594) |
|
eep (0.61282) |
|
eli (0.607257) |
|
nep (0.551775) |
|
ill (0.526778) |
|
eye (0.511509) |
|
nje (0.49776) |
|
cty (0.41632) |
|
fcc (0.39557) |
|
eje (0.395335) |
|
col (0.390016) |
|
elu (0.385356) |
|
cbr (0.383926) |
|
nco (0.323468) |
|
nca (0.273748) |
|
cov (0.264306) |
|
ece (0.229305) |
|
jej (0.197844) |
|
csp (0.161186) |
|
lun (0.150489) |
|
ese (0.126502) |
|
pgl (0.118483) |
|
ecc (0.115035) |
|
nbm (0.0993246) |