Non-Coding RNA Search

Ss1.1-rfli719b_n14.5

Sequence:


               
               CGAGCATCTGCAGTGACAATGCCAGATCCTTAACCCACTCACTGAGCCACACAGAAACTC
CGTATGTTTCCGTTTCTTTTTTTT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------TTGGTCTCCTCT
AAGAGAATTTCTTCAGGTCCTTACCCAGGTAAGCACTTGAACCTGACAAAGAGTAAGACA
TCTCTCTCACTTTTTAGGTGCAGACAACGATGCGTGAAAACCTGTCCACAGTTGAGGGGA
ATTTTGCCAACATTGATGAACGGATGAAGAAGCTGGGAAAGTGAGCACCTTTGGGAGATG
GAGAACAGGGGTAATCCCTACCCCTTTGAACTCCGTTAACACCTTACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGCATCTGCAGTGACAATGCCAGATCCTTAACCCACTCACTGAGCCACACAGAAACTC
CGTATGTTTCCGTTTCTTTTTTTT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------TTGGTCTCCTCT
AAGAGAATTTCTTCAGGTCCTTACCCAGGTAAGCACTTGAACCTGACAAAGAGTAAGACA
TCTCTCTCACTTTTTAGGTGCAGACAACGATGCGTGAAAACCTGTCCACAGTTGAGGGGA
ATTTTGCCAACATTGATGAACGGATGAAGAAGCTGGGAAAGTGAGCACCTTTGGGAGATG
GAGAACAGGGGTAATCCCTACCCCTTTGAACTCCGTTAACACCTTACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               88-324, gnl|bosTau2|chr5 (34763799-34764033)
               

               
               88-324, gnl|Hg17|chr12 (56210907-56210675)
               

               
               88-324, gnl|Mm7|chr10 (126782730-126782945)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               88-324, gnl|bosTau2|chr5 (34763799-34764033)
               

               
               88-324, gnl|Hg17|chr12 (56210907-56210675)
               

               
               88-324, gnl|Mm7|chr10 (126782730-126782945)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fli (0.202881)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)
               

               
               ecc (0.115035)

	88-324, gnl\|bosTau2\|chr5 (34763799-34764033)
	88-324, gnl\|Hg17\|chr12 (56210907-56210675)
	88-324, gnl\|Mm7\|chr10 (126782730-126782945)