Non-Coding RNA Search

Ss1.1-rfli722b_m18.5

Sequence:


               
               AACTTGCTAAACTAAGTGACTAAGTGTACAGAAGTGAAAACTAGGGCCTGGGATGTGGCA
CAGAAAAGGTTCTTGAGGGTTTCCGGTCCTGCAGCTGCAGAAGAGCTCTGCCCAAGGTGT
TGATTACTGCACAGAGCAGACTTGCCTTTGAAAGAGTCACTCATTTCTAAAACATGCCAG
ACACATGCTTCCTCTGCCCTGAAGTTATGAAGACTTCAACAATTAGACTGAAACCAGGGG
ATGCTCGCCTAGTGTCAGATTTCACTACTTGAAACCGCAGCCCAAGTTCATCTGAAGTTC
AAAAGCTCAGATTAGCAAGCCATACGAAGAAACTGAAGGATGTGTAAGCCTAAATCCTAG
TATTGAGGATGTGAAAAATGTAATTGAAAAGCAAGAAAAAATATTAATCCCCTGTGAACT
TGACTCAAGCAGTCATTCATATATACACACCCACTGTGCCTGGACAGAGTGTCTTTCTGT
AAGAGTCCTAACAGACACGCTCAGCTCCCTCCCTCAAGTTCAGAGTTCTCAAAAGGCTGG
CAGTTTGACCAGGGAAAAACATACCAAACAAATTTTGAGGAGAAGAATTTTCATCATGTC
ACAAGATCTAGTATGTCTTAAAATATTTGGAAAAGTCAAGAGTGTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACTTGCTAAACTAAGTGACTAAGTGTACAGAAGTGAAAACTAGGGCCTGGGATGTGGCA
CAGAAAAGGTTCTTGAGGGTTTCCGGTCCTGCAGCTGCAGAAGAGCTCTGCCCAAGGTGT
TGATTACTGCACAGAGCAGACTTGCCTTTGAAAGAGTCACTCATTTCTAAAACATGCCAG
ACACATGCTTCCTCTGCCCTGAAGTTATGAAGACTTCAACAATTAGACTGAAACCAGGGG
ATGCTCGCCTAGTGTCAGATTTCACTACTTGAAACCGCAGCCCAAGTTCATCTGAAGTTC
AAAAGCTCAGATTAGCAAGCCATACGAAGAAACTGAAGGATGTGTAAGCCTAAATCCTAG
TATTGAGGATGTGAAAAATGTAATTGAAAAGCAAGAAAAAATATTAATCCCCTGTGAACT
TGACTCAAGCAGTCATTCATATATACACACCCACTGTGCCTGGACAGAGTGTCTTTCTGT
AAGAGTCCTAACAGACACGCTCAGCTCCCTCCCTCAAGTTCAGAGTTCTCAAAAGGCTGG
CAGTTTGACCAGGGAAAAACATACCAAACAAATTTTGAGGAGAAGAATTTTCATCATGTC
ACAAGATCTAGTATGTCTTAAAATATTTGGAAAAGTCAAGAGTGTATT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               62-648, gnl|bosTau2|chr9 (33379317-33378700)
               

               
               62-648, gnl|Hg17|chr6 (90397464-90398067)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               62-648, gnl|bosTau2|chr9 (33379317-33378700)
               

               
               62-648, gnl|Hg17|chr6 (90397464-90398067)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fli (0.202881)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)
               

               
               cty (0.10408)

	62-648, gnl\|bosTau2\|chr9 (33379317-33378700)
	62-648, gnl\|Hg17\|chr6 (90397464-90398067)