Non-Coding RNA Search

Ss1.1-rfli726b_l23.5

Sequence:


               
               ACCCCACCTCCCCACCTCCACATACGGGTAGAAGCTCTCCTGGCCTCTTCGTCTTCCAGT
AGCCCTCGGTGTCGAAGGACAGCTTGTAGGTGCCCGCCCTCACCCGGCCTGGCGGTAGGA
GGCCGGGGCAGCGGCCGTCGGGGTCTGTAGAGCTGGGGAGAGGGCGGAAAGGGGGTTCAG
AGGGCCGGGCGAGCCCCCCGCGGAGGTCGCTCCAGTCTCGTGCCTAGTGGCCTCCGATGT
CCCGGCAGCCTGACTGGACTTGGGTGGGCAGGGCCGGGAGGCTCCACAGCAGCACAGCCT
CTGGGGCCCGGGCTTCTGCAGCAGCCCAGGGACGCCTCTGCACGGTCGTTCTAGCAAATC
ACGGAGACGGAAGGGGAAAAAGTGTCCCGCGGATACCCGTGAGCAACCCTTGTTTGTATC
TGGCCTGTGTATGTTTCAGATTTTCTCCATGCAGAGATGTGCTTGTTTACAAACCTAAAA
AAGGGTTATGCTGCCCATTCTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAGGGGGGGGCCCTTTTTTATTTTTTCTGGGGGGGGCCCAATTTTCCCCC
CCCCCTTTTTTTTTAAAAAAGGGGGCCCCTTTGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCCACCTCCCCACCTCCACATACGGGTAGAAGCTCTCCTGGCCTCTTCGTCTTCCAGT
AGCCCTCGGTGTCGAAGGACAGCTTGTAGGTGCCCGCCCTCACCCGGCCTGGCGGTAGGA
GGCCGGGGCAGCGGCCGTCGGGGTCTGTAGAGCTGGGGAGAGGGCGGAAAGGGGGTTCAG
AGGGCCGGGCGAGCCCCCCGCGGAGGTCGCTCCAGTCTCGTGCCTAGTGGCCTCCGATGT
CCCGGCAGCCTGACTGGACTTGGGTGGGCAGGGCCGGGAGGCTCCACAGCAGCACAGCCT
CTGGGGCCCGGGCTTCTGCAGCAGCCCAGGGACGCCTCTGCACGGTCGTTCTAGCAAATC
ACGGAGACGGAAGGGGAAAAAGTGTCCCGCGGATACCCGTGAGCAACCCTTGTTTGTATC
TGGCCTGTGTATGTTTCAGATTTTCTCCATGCAGAGATGTGCTTGTTTACAAACCTAAAA
AAGGGTTATGCTGCCCATTCTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAGGGGGGGGCCCTTTTTTATTTTTTCTGGGGGGGGCCCAATTTTCCCCC
CCCCCTTTTTTTTTAAAAAAGGGGGCCCCTTTGGGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-163, gnl|bosTau2|chr18 (16019251-16019403)
               

               
               10-163, gnl|Hg17|chr16 (88638405-88638543)
               

               
               10-163, gnl|Mm7|chr7 (137254151-137253989)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-163, gnl|bosTau2|chr18 (16019251-16019403)
               

               
               10-163, gnl|Hg17|chr16 (88638405-88638543)
               

               
               10-163, gnl|Mm7|chr7 (137254151-137253989)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fli (0.202881)
               

               
               ill (0.175593)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)
               

               
               ill (0.175593)

	10-163, gnl\|bosTau2\|chr18 (16019251-16019403)
	10-163, gnl\|Hg17\|chr16 (88638405-88638543)
	10-163, gnl\|Mm7\|chr7 (137254151-137253989)