Ss1.1-rfli732b_l12.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
CGTCCCCCTCCTTTTGTGTCATCAGCGGCTGGGTTCCTGACCCATGTGGCCTGTTATTCT TCACAGGGCTTCACGTTTGGCAAAGCCGGAGAGATCCTCACCAAGCGGCTGCGGTACATG GTTTTCAGGTCCATGCTGAGACAGGACGTGAGCTGGTTCGATGACCCTAAAAACACCACG GGAGCATTGACCACCAGGCTTGCCAATGATGCTGCTCAAGTTAAAGGGGCTATTGGTTCC AGGCTTGCTGTCATTACCCAAAATATAGCAAATCTTGGGACAGGCATTGTTATATCCTTC ATCTATGGCTGGCAACTAACACTTTTACTCTTGGCGATTGTACCCATCATTGCAATAGCA GGAGTTGTTGAAATGAAAATGTTATCTGGACAAGCACTGAAAGATAAGAAAGAGCTAGAA GGTGCCGGGAAGATTGCCACTGAAGCAATAGAAAACTTCCGAACTGTTGTTTCTTTGACT CGGGAGGAGAAGTTTGAATCTATGTATGACCAGAGTTTGCAGGTACCATACAGTAACTCT TTGAGGAAGGCACACATCTTTGGAATCACTTTTTCCATCACCCAGGCAATGATGTATTTT TCTTACGCTGCCTGTTTCCGGTTTGGTGCCTACTTGGTACAACATGGCCACATGGACTTT CAGGATGTTCTCTTAGTCTTCTCAGCTATTGTCTTTGGTGCCATGGCAGTGGGACAGGCT |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
CGTCCCCCTCCTTTTGTGTCATCAGCGGCTGGGTTCCTGACCCATGTGGCCTGTTATTCT TCACAGGGCTTCACGTTTGGCAAAGCCGGAGAGATCCTCACCAAGCGGCTGCGGTACATG GTTTTCAGGTCCATGCTGAGACAGGACGTGAGCTGGTTCGATGACCCTAAAAACACCACG GGAGCATTGACCACCAGGCTTGCCAATGATGCTGCTCAAGTTAAAGGGGCTATTGGTTCC AGGCTTGCTGTCATTACCCAAAATATAGCAAATCTTGGGACAGGCATTGTTATATCCTTC ATCTATGGCTGGCAACTAACACTTTTACTCTTGGCGATTGTACCCATCATTGCAATAGCA GGAGTTGTTGAAATGAAAATGTTATCTGGACAAGCACTGAAAGATAAGAAAGAGCTAGAA GGTGCCGGGAAGATTGCCACTGAAGCAATAGAAAACTTCCGAACTGTTGTTTCTTTGACT CGGGAGGAGAAGTTTGAATCTATGTATGACCAGAGTTTGCAGGTACCATACAGTAACTCT TTGAGGAAGGCACACATCTTTGGAATCACTTTTTCCATCACCCAGGCAATGATGTATTTT TCTTACGCTGCCTGTTTCCGGTTTGGTGCCTACTTGGTACAACATGGCCACATGGACTTT CAGGATGTTCTCTTAGTCTTCTCAGCTATTGTCTTTGGTGCCATGGCAGTGGGACAGGCT |
Aligned organism(s): 37 entry(ies) | More info |
Aligned organism(s): 37 entry(ies) | Help | Less info |
228-432, gnl|bosTau2|chr4 (13298734-13298530) | |
228-432, gnl|canFam2|chr14 (16616558-16616768) | |
228-432, gnl|danRer3|chrUn (26807426-26807216) | |
228-432, gnl|dasNov1|scaffold_8471 (40003-40184) | |
228-432, gnl|echTel1|scaffold_302239 (50118-50328) | |
228-432, gnl|fr1|chrUn (62365752-62365960) | |
228-432, gnl|galGal2|chr2 (20025382-20025592) | |
228-432, gnl|hg17|chr7 (86805258-86805468) | |
228-432, gnl|Hg17|chr7 (86805465-86805261) | |
228-432, gnl|loxAfr1|scaffold_8109 (18177-17967) | |
228-432, gnl|mm7|chr5 (8764625-8764415) | |
228-432, gnl|Mm7|chr5 (8875234-8875438) | |
228-432, gnl|monDom2|scaffold_7 (55335504-55335714) | |
228-432, gnl|oryCun1|scaffold_210279 (217826-217616) | |
228-432, gnl|panTro1|chr6 (88313521-88313731) | |
228-432, gnl|rheMac2|chr3 (129717004-129716794) | |
228-432, gnl|rn3|chr4 (21779643-21779433) | |
228-432, gnl|xenTro1|scaffold_188 (1800467-1800257) | |
531-674, gnl|bosTau2|chr4 (13288558-13288415) | |
531-674, gnl|canFam2|chr14 (16610231-16610413) | |
531-674, gnl|danRer3|chrUn (26807830-26807647) | |
531-674, gnl|dasNov1|scaffold_4777 (94054-93872) | |
531-674, gnl|echTel1|scaffold_302239 (41399-41581) | |
531-674, gnl|fr1|chrUn (62376724-62376897) | |
531-674, gnl|galGal2|chr2 (20021788-20021955) | |
531-674, gnl|hg17|chr7 (86793285-86793467) | |
531-674, gnl|Hg17|chr7 (86793436-86793293) | |
531-674, gnl|loxAfr1|scaffold_8109 (23562-23380) | |
531-674, gnl|mm7|chr5 (8771393-8771216) | |
531-674, gnl|Mm7|chr5 (8887153-8887296) | |
531-674, gnl|monDom2|scaffold_7 (55320330-55320512) | |
531-674, gnl|oryCun1|scaffold_210279 (224509-224339) | |
531-674, gnl|panTro1|chr6 (88301565-88301747) | |
531-674, gnl|rheMac2|chr3 (129728535-129728353) | |
531-674, gnl|rn3|chr4 (21784871-21784694) | |
531-674, gnl|tetNig1|chr8 (7531393-7531559) | |
531-674, gnl|xenTro1|scaffold_23 (899972-900138) |
Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
228-432, gnl|bosTau2|chr4 (13298734-13298530) | |
228-432, gnl|canFam2|chr14 (16616558-16616768) | |
228-432, gnl|danRer3|chrUn (26807426-26807216) | |
228-432, gnl|dasNov1|scaffold_8471 (40003-40184) | |
228-432, gnl|echTel1|scaffold_302239 (50118-50328) | |
228-432, gnl|fr1|chrUn (62365752-62365960) | |
228-432, gnl|galGal2|chr2 (20025382-20025592) | |
228-432, gnl|hg17|chr7 (86805258-86805468) | |
228-432, gnl|Hg17|chr7 (86805465-86805261) | |
228-432, gnl|loxAfr1|scaffold_8109 (18177-17967) | |
228-432, gnl|mm7|chr5 (8764625-8764415) | |
228-432, gnl|Mm7|chr5 (8875234-8875438) | |
228-432, gnl|monDom2|scaffold_7 (55335504-55335714) | |
228-432, gnl|oryCun1|scaffold_210279 (217826-217616) | |
228-432, gnl|panTro1|chr6 (88313521-88313731) | |
228-432, gnl|rheMac2|chr3 (129717004-129716794) | |
228-432, gnl|rn3|chr4 (21779643-21779433) | |
228-432, gnl|xenTro1|scaffold_188 (1800467-1800257) | |
531-674, gnl|bosTau2|chr4 (13288558-13288415) | |
531-674, gnl|canFam2|chr14 (16610231-16610413) | |
531-674, gnl|danRer3|chrUn (26807830-26807647) | |
531-674, gnl|dasNov1|scaffold_4777 (94054-93872) | |
531-674, gnl|echTel1|scaffold_302239 (41399-41581) | |
531-674, gnl|fr1|chrUn (62376724-62376897) | |
531-674, gnl|galGal2|chr2 (20021788-20021955) | |
531-674, gnl|hg17|chr7 (86793285-86793467) | |
531-674, gnl|Hg17|chr7 (86793436-86793293) | |
531-674, gnl|loxAfr1|scaffold_8109 (23562-23380) | |
531-674, gnl|mm7|chr5 (8771393-8771216) | |
531-674, gnl|Mm7|chr5 (8887153-8887296) | |
531-674, gnl|monDom2|scaffold_7 (55320330-55320512) | |
531-674, gnl|oryCun1|scaffold_210279 (224509-224339) | |
531-674, gnl|panTro1|chr6 (88301565-88301747) | |
531-674, gnl|rheMac2|chr3 (129728535-129728353) | |
531-674, gnl|rn3|chr4 (21784871-21784694) | |
531-674, gnl|tetNig1|chr8 (7531393-7531559) | |
531-674, gnl|xenTro1|scaffold_23 (899972-900138) |
Expressed library(ies): 3 entry(ies) | More info |
Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
fli (0.202881) | |
bla (0.124347) | |
clu (0.119646) |