Non-Coding RNA Search

Ss1.1-rfty501b_g4.5

Sequence:


               
               TTACTTTGTCACTTCCTCCCCCAAAGAATGGGATGATCCTGTATGTATGTTGTTTATTTT
TTTACTTCTTCATTGTAGACTTGTCTTTTTTGATGGTACATGGTTCACTGCCTTATAAAC
AGTGTTTTATAGAGATAAAAACAAAAAGCAAAGAATAGGAAGAAAATTTGTAAAACAGAT
AAAAGTGTTGGAAAATGTGCAATATGAGATGTGGCAAATCTGTAACAGGAAAAAGTCTGT
ATTGTTCAAATCTAGAAAAATTCTAGTTCTATCCAATTATAAATTAGTGCCTTTCCCGAT
CAATTCTATCATGTGCAATACTTCATGTAAAGTATTTTCTAAGTGCAATAAAGTGTTTTT
GTTTGTCTTTGTACTCAGTGCAATTATAAGCTGCTTTTATGTATGTTAAAATAAAACAAA
CAACAAAATTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTACTTTGTCACTTCCTCCCCCAAAGAATGGGATGATCCTGTATGTATGTTGTTTATTTT
TTTACTTCTTCATTGTAGACTTGTCTTTTTTGATGGTACATGGTTCACTGCCTTATAAAC
AGTGTTTTATAGAGATAAAAACAAAAAGCAAAGAATAGGAAGAAAATTTGTAAAACAGAT
AAAAGTGTTGGAAAATGTGCAATATGAGATGTGGCAAATCTGTAACAGGAAAAAGTCTGT
ATTGTTCAAATCTAGAAAAATTCTAGTTCTATCCAATTATAAATTAGTGCCTTTCCCGAT
CAATTCTATCATGTGCAATACTTCATGTAAAGTATTTTCTAAGTGCAATAAAGTGTTTTT
GTTTGTCTTTGTACTCAGTGCAATTATAAGCTGCTTTTATGTATGTTAAAATAAAACAAA
CAACAAAATTGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               5-432, gnl|bosTau2|chr5 (59241046-59241473)
               

               
               5-432, gnl|Hg17|chr12 (9796777-9796345)
               

               
               5-432, gnl|Mm7|chr6 (129291049-129290637)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-432, gnl|bosTau2|chr5 (59241046-59241473)
               

               
               5-432, gnl|Hg17|chr12 (9796777-9796345)
               

               
               5-432, gnl|Mm7|chr6 (129291049-129290637)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fty (0.17584)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               lnt (0.142308)

	5-432, gnl\|bosTau2\|chr5 (59241046-59241473)
	5-432, gnl\|Hg17\|chr12 (9796777-9796345)
	5-432, gnl\|Mm7\|chr6 (129291049-129290637)