Non-Coding RNA Search

Ss1.1-rfty507b_e8.5

Sequence:


               
               CGCAGGCTTCGCGCTCGGCCCTCAGGTGTCACCCCGCGCGGAAATTAAGGGAACTATATG
GGATGGACAGGGTGAAGGGACGGGCCAGAATGTGGGGGCCCCAGGCTTGACGTGCAGGAT
AGATGGGAAAAAAAGGCAGCTTCAAAGAAAAAGCCTCGTGCATAGGAAGAAACATTTGCT
TAGAAAACCGTCAACATTCTTTGGTCAAAAACCAAAAAGGGTTACCCCTTCCCTGCAGAC
AGACACCCACACACTCCCCTTAGAAGAAAAAGTTAGATATTTATCGGCTGGGGCAAGATT
TATGGATGTTTAAAGACCACAGGTCAGCAGATTCATTTAAAAGAGAAATTGAGGGCTAAT
TGAGAGTCGCTTGAGATCTCCATACTCTCTGGGAAAGCCCATCAACTTCAAATACTGCTG
TGGAGATGAAAAACAATTTGAAATGATTTTTCTTACCATGTAGCTTGGTCAATAAATTAA
AATCATTTTAGAATAAAGTTTTCTCTATTGTATCACGTTTACTTTTGAAACAGATACTTC
TATTTGTTTTATTTCATTAAGCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCAGGCTTCGCGCTCGGCCCTCAGGTGTCACCCCGCGCGGAAATTAAGGGAACTATATG
GGATGGACAGGGTGAAGGGACGGGCCAGAATGTGGGGGCCCCAGGCTTGACGTGCAGGAT
AGATGGGAAAAAAAGGCAGCTTCAAAGAAAAAGCCTCGTGCATAGGAAGAAACATTTGCT
TAGAAAACCGTCAACATTCTTTGGTCAAAAACCAAAAAGGGTTACCCCTTCCCTGCAGAC
AGACACCCACACACTCCCCTTAGAAGAAAAAGTTAGATATTTATCGGCTGGGGCAAGATT
TATGGATGTTTAAAGACCACAGGTCAGCAGATTCATTTAAAAGAGAAATTGAGGGCTAAT
TGAGAGTCGCTTGAGATCTCCATACTCTCTGGGAAAGCCCATCAACTTCAAATACTGCTG
TGGAGATGAAAAACAATTTGAAATGATTTTTCTTACCATGTAGCTTGGTCAATAAATTAA
AATCATTTTAGAATAAAGTTTTCTCTATTGTATCACGTTTACTTTTGAAACAGATACTTC
TATTTGTTTTATTTCATTAAGCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-554, gnl|bosTau2|chr28 (22720220-22719657)
               

               
               1-554, gnl|Hg17|chr10 (74925075-74924542)
               

               
               1-554, gnl|Mm7|chr14 (18202461-18201967)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-554, gnl|bosTau2|chr28 (22720220-22719657)
               

               
               1-554, gnl|Hg17|chr10 (74925075-74924542)
               

               
               1-554, gnl|Mm7|chr14 (18202461-18201967)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fty (0.17584)
               

               
               ste (0.135208)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               ste (0.135208)

	1-554, gnl\|bosTau2\|chr28 (22720220-22719657)
	1-554, gnl\|Hg17\|chr10 (74925075-74924542)
	1-554, gnl\|Mm7\|chr14 (18202461-18201967)