Non-Coding RNA Search

Ss1.1-rfty508b_f6.5

Sequence:


               
               AATATTTCAGTTCAGAATTTGAACTAAAGGAAGGGAAGAAAAGTATGTGATTTTTACCTT
TTTTAACAAATGTGAAAGAATCAGTTTTAGAAATTTCATGATAGTGAGTTGTTTGGCATT
TGTTACATGTATAGAGAGAAGACTAATAATCTATATTTATAACTAAATCATTGAAACAGA
AAAAGAATCCTGTTGACTTTACATTGTTACCCTTTTGTTTGCCTTTCTGACTGTATCCCC
TTCAGACTTGGCTTCAGGACTTTGGTTTGTGCTGCTCCTTTCCCCTCCCCTGTTTTTTTC
CCTTCATTTTGGAAATAAGTTTCTGTATATGTTGTAATTTTAGCTAGTTTTTTGTTTTTT
AATTAACCCTCTCTCACCCTACTCGCCGCCTCCTTCCTATGGTAAATAATATAAAATTTT
CAGAATTTAGAAGTTATTTTTCCCATATAAAGGAGAAAAATATTTGGAACTAGCAGAGAT
AAAATGAGAGACTTGAACCCTGGTGAGCTCTAAAATAATTAGAAAAGATTATATTCTTGA
AAGAGAAATGTCACTTACTTAGAGATGTAGCTTCTGACCAGTAAACCATTAGGACTTGTT
ATAAACATTGTTCCCAACCTATTACCATACTTTACTCTCTGTGAGAATTTAAGTGACAGA
GTCCTTCTTGATAAATTCATGGGTCATTTGAGATGTCGAGTTACTTTAGATTTTTTTCAA
ATAAGTAAATAATATTCATGTAAAAAACTGGACAAAGGAAGAAAAATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATATTTCAGTTCAGAATTTGAACTAAAGGAAGGGAAGAAAAGTATGTGATTTTTACCTT
TTTTAACAAATGTGAAAGAATCAGTTTTAGAAATTTCATGATAGTGAGTTGTTTGGCATT
TGTTACATGTATAGAGAGAAGACTAATAATCTATATTTATAACTAAATCATTGAAACAGA
AAAAGAATCCTGTTGACTTTACATTGTTACCCTTTTGTTTGCCTTTCTGACTGTATCCCC
TTCAGACTTGGCTTCAGGACTTTGGTTTGTGCTGCTCCTTTCCCCTCCCCTGTTTTTTTC
CCTTCATTTTGGAAATAAGTTTCTGTATATGTTGTAATTTTAGCTAGTTTTTTGTTTTTT
AATTAACCCTCTCTCACCCTACTCGCCGCCTCCTTCCTATGGTAAATAATATAAAATTTT
CAGAATTTAGAAGTTATTTTTCCCATATAAAGGAGAAAAATATTTGGAACTAGCAGAGAT
AAAATGAGAGACTTGAACCCTGGTGAGCTCTAAAATAATTAGAAAAGATTATATTCTTGA
AAGAGAAATGTCACTTACTTAGAGATGTAGCTTCTGACCAGTAAACCATTAGGACTTGTT
ATAAACATTGTTCCCAACCTATTACCATACTTTACTCTCTGTGAGAATTTAAGTGACAGA
GTCCTTCTTGATAAATTCATGGGTCATTTGAGATGTCGAGTTACTTTAGATTTTTTTCAA
ATAAGTAAATAATATTCATGTAAAAAACTGGACAAAGGAAGAAAAATT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-767, gnl|bosTau2|chr1 (42994453-42993679)
               

               
               1-767, gnl|Hg17|chr3 (198044158-198044983)
               

               
               1-767, gnl|Mm7|chr16 (31694154-31693384)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-767, gnl|bosTau2|chr1 (42994453-42993679)
               

               
               1-767, gnl|Hg17|chr3 (198044158-198044983)
               

               
               1-767, gnl|Mm7|chr16 (31694154-31693384)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               cbl (0.45919)
               

               
               sag (0.182715)
               

               
               fty (0.17584)
               

               
               ton (0.1755)
               

               
               ste (0.135208)
               

               
               pla (0.133672)
               

               
               kid (0.129735)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.45919)
               

               
               sag (0.182715)
               

               
               fty (0.17584)
               

               
               ton (0.1755)
               

               
               ste (0.135208)
               

               
               pla (0.133672)
               

               
               kid (0.129735)

	1-767, gnl\|bosTau2\|chr1 (42994453-42993679)
	1-767, gnl\|Hg17\|chr3 (198044158-198044983)
	1-767, gnl\|Mm7\|chr16 (31694154-31693384)

	cbl (0.45919)
	sag (0.182715)
	fty (0.17584)
	ton (0.1755)
	ste (0.135208)
	pla (0.133672)
	kid (0.129735)