Ss1.1-rfty512b_e1.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTTTAAATATCGAATAGCTAGCATCTTGTCTTTTACCTTTTAAGGTCAGGGAACATC TTGCCCTGGACACACATACATTATCAATGTAATGTTTCATAAAGCTTTAGAAATGAGCTG ATGTCTCCTTAAATAATAAACTACAAACATGACATTGTTATTTTAATATCTTCAAGTAAA TAATCTGAGGGTGTGTGTTATACACGTTAGCACCAACACTAAGTTGTGCCTTGTACATTT GCATTGGCTGTACATGCAAAGGATTATTAAGTCAACTAGATAAGGTAGATTCCTTAATTT ACCATAAAGTTCTGCCTTGTTGATGCTATAGGATAACTTGCATTTTAAAGTATATTTGCA CATTTTACATATGATGCTCTATAGTTGCCTTTGGGTTTTCTGTACAGTTGGTGTTTGTTG ATATTAAATGGAAATCATAGACCTGAAATACACTGTTCTACGTGAAGTAAATTGATATAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTTTAAATATCGAATAGCTAGCATCTTGTCTTTTACCTTTTAAGGTCAGGGAACATC TTGCCCTGGACACACATACATTATCAATGTAATGTTTCATAAAGCTTTAGAAATGAGCTG ATGTCTCCTTAAATAATAAACTACAAACATGACATTGTTATTTTAATATCTTCAAGTAAA TAATCTGAGGGTGTGTGTTATACACGTTAGCACCAACACTAAGTTGTGCCTTGTACATTT GCATTGGCTGTACATGCAAAGGATTATTAAGTCAACTAGATAAGGTAGATTCCTTAATTT ACCATAAAGTTCTGCCTTGTTGATGCTATAGGATAACTTGCATTTTAAAGTATATTTGCA CATTTTACATATGATGCTCTATAGTTGCCTTTGGGTTTTCTGTACAGTTGGTGTTTGTTG ATATTAAATGGAAATCATAGACCTGAAATACACTGTTCTACGTGAAGTAAATTGATATAA |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 2-480, gnl|bosTau2|chr24 (44893459-44892986) | |
| 2-480, gnl|canFam2|chr1 (16679247-16678802) | |
| 2-480, gnl|canFam2|chr1 (16679306-16678747) | |
| 2-480, gnl|dasNov1|scaffold_78830 (3565-3129) | |
| 2-480, gnl|dasNov1|scaffold_78830 (3623-3078) | |
| 2-480, gnl|echTel1|scaffold_52801 (1129-1579) | |
| 2-480, gnl|echTel1|scaffold_52801 (1072-1628) | |
| 2-480, gnl|galGal2|chr2 (67559237-67558700) | |
| 2-480, gnl|hg17|chr18 (59207461-59207995) | |
| 2-480, gnl|Hg17|chr18 (59207977-59207522) | |
| 2-480, gnl|hg17|chr22 (32490489-32490943) | |
| 2-480, gnl|loxAfr1|scaffold_11430 (23131-22689) | |
| 2-480, gnl|loxAfr1|scaffold_11430 (23190-22643) | |
| 2-480, gnl|mm7|chr1 (106671012-106671453) | |
| 2-480, gnl|mm7|chr1 (106670952-106671491) | |
| 2-480, gnl|Mm7|chr1 (106671474-106671017) | |
| 2-480, gnl|monDom2|scaffold_4 (67379017-67379574) | |
| 2-480, gnl|oryCun1|scaffold_184662 (10905-10468) | |
| 2-480, gnl|oryCun1|scaffold_184662 (10963-10407) | |
| 2-480, gnl|panTro1|chr17 (56043934-56044470) | |
| 2-480, gnl|panTro1|chr23_random (9849124-9849573) | |
| 2-480, gnl|rheMac2|chr18 (56771611-56772042) | |
| 2-480, gnl|rheMac2|chr18 (56771561-56772091) | |
| 2-480, gnl|rn3|chr13 (12959843-12960284) | |
| 2-480, gnl|rn3|chr13 (12959788-12960326) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-480, gnl|bosTau2|chr24 (44893459-44892986) | |
| 2-480, gnl|canFam2|chr1 (16679247-16678802) | |
| 2-480, gnl|canFam2|chr1 (16679306-16678747) | |
| 2-480, gnl|dasNov1|scaffold_78830 (3565-3129) | |
| 2-480, gnl|dasNov1|scaffold_78830 (3623-3078) | |
| 2-480, gnl|echTel1|scaffold_52801 (1129-1579) | |
| 2-480, gnl|echTel1|scaffold_52801 (1072-1628) | |
| 2-480, gnl|galGal2|chr2 (67559237-67558700) | |
| 2-480, gnl|hg17|chr18 (59207461-59207995) | |
| 2-480, gnl|Hg17|chr18 (59207977-59207522) | |
| 2-480, gnl|hg17|chr22 (32490489-32490943) | |
| 2-480, gnl|loxAfr1|scaffold_11430 (23131-22689) | |
| 2-480, gnl|loxAfr1|scaffold_11430 (23190-22643) | |
| 2-480, gnl|mm7|chr1 (106671012-106671453) | |
| 2-480, gnl|mm7|chr1 (106670952-106671491) | |
| 2-480, gnl|Mm7|chr1 (106671474-106671017) | |
| 2-480, gnl|monDom2|scaffold_4 (67379017-67379574) | |
| 2-480, gnl|oryCun1|scaffold_184662 (10905-10468) | |
| 2-480, gnl|oryCun1|scaffold_184662 (10963-10407) | |
| 2-480, gnl|panTro1|chr17 (56043934-56044470) | |
| 2-480, gnl|panTro1|chr23_random (9849124-9849573) | |
| 2-480, gnl|rheMac2|chr18 (56771611-56772042) | |
| 2-480, gnl|rheMac2|chr18 (56771561-56772091) | |
| 2-480, gnl|rn3|chr13 (12959843-12960284) | |
| 2-480, gnl|rn3|chr13 (12959788-12960326) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| fty (0.351679) | |
| mgp (0.230681) | |
| lnt (0.142308) | |
| ebs (0.118301) | |
| spc (0.113366) | |
| nbm (0.0993246) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.351679) | |
| mgp (0.230681) | |
| lnt (0.142308) | |
| ebs (0.118301) | |
| spc (0.113366) | |
| nbm (0.0993246) |