Ss1.1-rfty512b_l13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCTGAGTCTGCCTCCCGGGCTGGAACTGTCCCTGGGTCCGGGGCAGGAGTACCGGGCCC TGCAGTTGCATCTGCACTGGGGGTCTGCGGGGCGCCCGGGTTCGGAACATACAGTTGGCG GTTACCGTTTCCCTGCTGAGATCCATGTGGTTCACCTCAGCACTGCATTTGCCAAAATTG ACGAGGCCTTGGGGCGCCCGAGGGGCTTGGCCGTGTTGGCAGCCTTTCTGCAGGAAGGCC CAGAAGAAAACAGTGCCTATGAACAGTTGCTGTCACATTTGGGAGAAATCGCCGACGAAG ACTCAGAGACTTGGGTCCCAGGACTGGACGTATCTGCACTGTTGCCCTCCGACCTCAACC GCTACTTCCGATATGAGGGGTCTCTCACCACACCCCCCTGTGCCCAGGGCGTCGTCTGGA CTGTGTTCAACGAGACAGTAAAGCTGAGTGCTAAGCAGCTCCACACGCTCTCAGACTCCC TGTGGGGACCTGACGACTCTCGGCTACAGCTGAACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCTGAGTCTGCCTCCCGGGCTGGAACTGTCCCTGGGTCCGGGGCAGGAGTACCGGGCCC TGCAGTTGCATCTGCACTGGGGGTCTGCGGGGCGCCCGGGTTCGGAACATACAGTTGGCG GTTACCGTTTCCCTGCTGAGATCCATGTGGTTCACCTCAGCACTGCATTTGCCAAAATTG ACGAGGCCTTGGGGCGCCCGAGGGGCTTGGCCGTGTTGGCAGCCTTTCTGCAGGAAGGCC CAGAAGAAAACAGTGCCTATGAACAGTTGCTGTCACATTTGGGAGAAATCGCCGACGAAG ACTCAGAGACTTGGGTCCCAGGACTGGACGTATCTGCACTGTTGCCCTCCGACCTCAACC GCTACTTCCGATATGAGGGGTCTCTCACCACACCCCCCTGTGCCCAGGGCGTCGTCTGGA CTGTGTTCAACGAGACAGTAAAGCTGAGTGCTAAGCAGCTCCACACGCTCTCAGACTCCC TGTGGGGACCTGACGACTCTCGGCTACAGCTGAACT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1-119, + strand, RNAz p=0.627681 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-119, + strand, RNAz p=0.627681 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 1-140, gnl|bosTau2|chr8 (28416857-28416996) | |
| 1-140, gnl|Hg17|chr9 (35666064-35666203) | |
| 1-140, gnl|Mm7|chr4 (43522710-43522849) | |
| 299-458, gnl|bosTau2|chr8 (28419742-28419901) | |
| 299-458, gnl|Hg17|chr9 (35669180-35669408) | |
| 299-458, gnl|Mm7|chr4 (43525639-43525798) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-140, gnl|bosTau2|chr8 (28416857-28416996) | |
| 1-140, gnl|Hg17|chr9 (35666064-35666203) | |
| 1-140, gnl|Mm7|chr4 (43522710-43522849) | |
| 299-458, gnl|bosTau2|chr8 (28419742-28419901) | |
| 299-458, gnl|Hg17|chr9 (35669180-35669408) | |
| 299-458, gnl|Mm7|chr4 (43525639-43525798) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cst (0.280073) | |
| fty (0.17584) |