Ss1.1-rfty514b_m5.5
|
TGGAGTGTTGGTATCAGGCGAGTTCTGAGATCTTCCTTTTATCTTAAACCAAGTGTCCCT
TTCTGAGGGCTGTTCTCCCTTTGGGGACTGTAGGGGGTCTCATACTGTTTTGATAGGACG
CCTGTTTAGATTTCTTTCTGTAGATAGAACTATAAAGGCAGTAGTGTTAACGTCTTCGTG
GTTTGAGCATCATTGTTGCTTTTGGTTCGGATGGTGAATCTAGCCCGCAAGTCCTACCTT
CCTCCCGTCCTTAGGAAGCTGTGATGCCGTGTGCAATTATTTGAATGAAGGGGAAATAGT
AAATTAAAGTGTGTGTAGTGTGAAGGAAAAGAAAACTGTTGGGGAGACAGACGTGCTGCC
GGTGTCTGCGGAGCAGTAACTAGCAGGGGAAGGGAAGGCTCGCCGAGCAGTGATGACGGT
GCCCTGACTCTCTCTGCTGTTGAAGAGGTTTCTGGAGCTTGCTTTCCACTCGGTTGAATT
TTTAAGTTGGTTGGCTCGGTAGCTTTTATCGCCAGAGCTCATTTACGTGTGTCCCGAACA
CAGTGGGATCACATCCAGTTGGGCTGTTTATCGGAGCCACTCAAATCACCTAAAAATTCC
AAGCCCTGACCTGTGGTGCCGCCTTGGGCGTCTCTGGTTTAGATGCGCGATGACAACGCA
GTCTCCTGAGCTGCACCTTCTCCATCTGCTGGGTTTTGTGGTGAAGGGCTAGGGTTTGGT
GCCGGTGGGCATTCCCGCAGGTGGAGCCTGCAGCACCAGGCAGAGCGGGGCTTCGAGTGG
ACCAAAGAGATGCGTCAGAGGGGCGTGCAGGCATCCACTGAAAACCACCTGAGGGTGGGA
AGTTGGAGACAGAAGGTTTTCAGTGACAGAAAACATAACCCTTTCATTAGTTGTTCAGAA
TGGGAGCTAGCATGAGATCGAGAAGCGTGAACTACCCCTCGTCGTGAGAGTCCAAAGCCC
CTTCACCGTTTTGCATATTCCGGTTTGAATAGTTTGTATTGGAATTTGATGCAGCGCTTG
GTATGTTTTGGTGCATCCAAGGGAAAAATTGGTGTTTTTACTTTCGGGACTTGCAGGACC
CAAGGGCATGTCATTGGTTTGCTGTCAGATTGTATTCTGTATATATGTTTTCATGTAAAT
AAACGAAAGTCTATATCAGAGTTA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGGAGTGTTGGTATCAGGCGAGTTCTGAGATCTTCCTTTTATCTTAAACCAAGTGTCCCT
TTCTGAGGGCTGTTCTCCCTTTGGGGACTGTAGGGGGTCTCATACTGTTTTGATAGGACG
CCTGTTTAGATTTCTTTCTGTAGATAGAACTATAAAGGCAGTAGTGTTAACGTCTTCGTG
GTTTGAGCATCATTGTTGCTTTTGGTTCGGATGGTGAATCTAGCCCGCAAGTCCTACCTT
CCTCCCGTCCTTAGGAAGCTGTGATGCCGTGTGCAATTATTTGAATGAAGGGGAAATAGT
AAATTAAAGTGTGTGTAGTGTGAAGGAAAAGAAAACTGTTGGGGAGACAGACGTGCTGCC
GGTGTCTGCGGAGCAGTAACTAGCAGGGGAAGGGAAGGCTCGCCGAGCAGTGATGACGGT
GCCCTGACTCTCTCTGCTGTTGAAGAGGTTTCTGGAGCTTGCTTTCCACTCGGTTGAATT
TTTAAGTTGGTTGGCTCGGTAGCTTTTATCGCCAGAGCTCATTTACGTGTGTCCCGAACA
CAGTGGGATCACATCCAGTTGGGCTGTTTATCGGAGCCACTCAAATCACCTAAAAATTCC
AAGCCCTGACCTGTGGTGCCGCCTTGGGCGTCTCTGGTTTAGATGCGCGATGACAACGCA
GTCTCCTGAGCTGCACCTTCTCCATCTGCTGGGTTTTGTGGTGAAGGGCTAGGGTTTGGT
GCCGGTGGGCATTCCCGCAGGTGGAGCCTGCAGCACCAGGCAGAGCGGGGCTTCGAGTGG
ACCAAAGAGATGCGTCAGAGGGGCGTGCAGGCATCCACTGAAAACCACCTGAGGGTGGGA
AGTTGGAGACAGAAGGTTTTCAGTGACAGAAAACATAACCCTTTCATTAGTTGTTCAGAA
TGGGAGCTAGCATGAGATCGAGAAGCGTGAACTACCCCTCGTCGTGAGAGTCCAAAGCCC
CTTCACCGTTTTGCATATTCCGGTTTGAATAGTTTGTATTGGAATTTGATGCAGCGCTTG
GTATGTTTTGGTGCATCCAAGGGAAAAATTGGTGTTTTTACTTTCGGGACTTGCAGGACC
CAAGGGCATGTCATTGGTTTGCTGTCAGATTGTATTCTGTATATATGTTTTCATGTAAAT
AAACGAAAGTCTATATCAGAGTTA
|
|
1-352, gnl|bosTau2|chr13 (8766012-8766361) |
|
1-352, gnl|canFam2|chr2 (31701552-31700876) |
|
1-352, gnl|dasNov1|scaffold_73913 (6199-5534) |
|
1-352, gnl|echTel1|scaffold_277550 (1550-2181) |
|
1-352, gnl|hg17|chr10 (7241444-7242092) |
|
1-352, gnl|Hg17|chr10 (7241890-7241536) |
|
1-352, gnl|loxAfr1|scaffold_41274 (11272-11924) |
|
1-352, gnl|mm7|chr2 (10533555-10532916) |
|
1-352, gnl|Mm7|chr2 (10533131-10533462) |
|
1-352, gnl|monDom2|scaffold_30 (3600989-3601629) |
|
1-352, gnl|oryCun1|scaffold_198138 (134487-133817) |
|
1-352, gnl|panTro1|chr8 (7344353-7345018) |
|
1-352, gnl|rheMac2|chr9 (7381245-7381904) |
|
1-352, gnl|rn3|chr17 (79207976-79208621) |
| |
|
500-1164, gnl|bosTau2|chr13 (8766539-8767224) |
|
500-1164, gnl|Hg17|chr10 (7241370-7240681) |
|
500-1164, gnl|Mm7|chr2 (10533627-10534323) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-352, gnl|bosTau2|chr13 (8766012-8766361) |
|
1-352, gnl|canFam2|chr2 (31701552-31700876) |
|
1-352, gnl|dasNov1|scaffold_73913 (6199-5534) |
|
1-352, gnl|echTel1|scaffold_277550 (1550-2181) |
|
1-352, gnl|hg17|chr10 (7241444-7242092) |
|
1-352, gnl|Hg17|chr10 (7241890-7241536) |
|
1-352, gnl|loxAfr1|scaffold_41274 (11272-11924) |
|
1-352, gnl|mm7|chr2 (10533555-10532916) |
|
1-352, gnl|Mm7|chr2 (10533131-10533462) |
|
1-352, gnl|monDom2|scaffold_30 (3600989-3601629) |
|
1-352, gnl|oryCun1|scaffold_198138 (134487-133817) |
|
1-352, gnl|panTro1|chr8 (7344353-7345018) |
|
1-352, gnl|rheMac2|chr9 (7381245-7381904) |
|
1-352, gnl|rn3|chr17 (79207976-79208621) |
| |
|
500-1164, gnl|bosTau2|chr13 (8766539-8767224) |
|
500-1164, gnl|Hg17|chr10 (7241370-7240681) |
|
500-1164, gnl|Mm7|chr2 (10533627-10534323) |
|
cki (0.495704) |
|
fty (0.17584) |
|
duo (0.172801) |
|
csk (0.140746) |
|
eep (0.122564) |
|
cki (0.495704) |
|
fty (0.17584) |
|
duo (0.172801) |
|
csk (0.140746) |
|
eep (0.122564) |
