Ss1.1-rfty519b_o2.5
|
GCCTCTCTACTCCCCCCACTGTTCCTCAGGACTTCTGTGGACCAGAACCCTTCCCGCCCC
CAGCCCACCATGGCCCCTCCAGGCGGCATCCTGTTCCTGCTTTTGCTCCCAGTGGCTGCA
GCGCAGGTGACCTCAGGTTCCTGTTCCGGATGTGGGCCCCTCTCCCTGCCACTCCTAGCA
GGCCTCGTGGCCGCTGATGCAGTTGTGTCACTGTTAATCGTGGTGGGGGTATTTGTGTGC
GGACGCCCACGCAGCAGGCCCACCCAAGAAGACGGCAAAATCTACATCAACATGCCGGGC
AGGGGCTGACCCCGCTGTAAGCCGTTACCTGCAACCTTTGACTCCTGACCCTCCCATCCC
AGATTGTGTGTGGCGGCACAGGAAACTGGCCCCTCTTGGGGATTGGAATAAAGTCTTTGA
AATACCAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCCTCTCTACTCCCCCCACTGTTCCTCAGGACTTCTGTGGACCAGAACCCTTCCCGCCCC
CAGCCCACCATGGCCCCTCCAGGCGGCATCCTGTTCCTGCTTTTGCTCCCAGTGGCTGCA
GCGCAGGTGACCTCAGGTTCCTGTTCCGGATGTGGGCCCCTCTCCCTGCCACTCCTAGCA
GGCCTCGTGGCCGCTGATGCAGTTGTGTCACTGTTAATCGTGGTGGGGGTATTTGTGTGC
GGACGCCCACGCAGCAGGCCCACCCAAGAAGACGGCAAAATCTACATCAACATGCCGGGC
AGGGGCTGACCCCGCTGTAAGCCGTTACCTGCAACCTTTGACTCCTGACCCTCCCATCCC
AGATTGTGTGTGGCGGCACAGGAAACTGGCCCCTCTTGGGGATTGGAATAAAGTCTTTGA
AATACCAAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
133-268, gnl|bosTau2|chr18 (41710123-41710258) |
|
133-268, gnl|canFam2|chr1 (119670323-119670017) |
|
133-268, gnl|echTel1|scaffold_90579 (971-1277) |
|
133-268, gnl|hg17|chr19 (41086340-41086648) |
|
133-268, gnl|Hg17|chr19 (41086510-41086645) |
|
133-268, gnl|loxAfr1|scaffold_83337 (757-1054) |
|
133-268, gnl|mm7|chr7 (27361603-27361286) |
|
133-268, gnl|Mm7|chr7 (27361422-27361287) |
|
133-268, gnl|monDom2|scaffold_139 (1977080-1977373) |
|
133-268, gnl|oryCun1|scaffold_168460 (8649-8351) |
|
133-268, gnl|panTro1|chr20 (37928127-37928435) |
|
133-268, gnl|rheMac2|chr19 (42386835-42387141) |
|
133-268, gnl|rn3|chr1 (85448138-85447831) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
133-268, gnl|bosTau2|chr18 (41710123-41710258) |
|
133-268, gnl|canFam2|chr1 (119670323-119670017) |
|
133-268, gnl|echTel1|scaffold_90579 (971-1277) |
|
133-268, gnl|hg17|chr19 (41086340-41086648) |
|
133-268, gnl|Hg17|chr19 (41086510-41086645) |
|
133-268, gnl|loxAfr1|scaffold_83337 (757-1054) |
|
133-268, gnl|mm7|chr7 (27361603-27361286) |
|
133-268, gnl|Mm7|chr7 (27361422-27361287) |
|
133-268, gnl|monDom2|scaffold_139 (1977080-1977373) |
|
133-268, gnl|oryCun1|scaffold_168460 (8649-8351) |
|
133-268, gnl|panTro1|chr20 (37928127-37928435) |
|
133-268, gnl|rheMac2|chr19 (42386835-42387141) |
|
133-268, gnl|rn3|chr1 (85448138-85447831) |
|
csp (0.483559) |
|
fty (0.351679) |
|
cag (0.151194) |
|
nmm (0.132802) |
|
cly (0.120642) |
|
nbm (0.0993246) |
|
csp (0.483559) |
|
fty (0.351679) |
|
cag (0.151194) |
|
nmm (0.132802) |
|
cly (0.120642) |
|
nbm (0.0993246) |
