Ss1.1-rfty520b_o22.5
|
CCACACGGTGCGGAAGCTACACGTTGGGGACTTCGTGTGGGTGGCACAGGAGACCAGTCC
CAGAGACCCCGCAAGACCCAGGGAACTAGTCCTGGACCACATCGTGGAGCGGAAAAGGCT
GGATGACCTGTGCCGCAGCATCATCGATGGCCGCTTCCGGGAGCAGAAGTTCCGGCTGAA
GCGCTGCGGCCTGGGGCACCCAGTATACCTGGTGGAGGAGCGTGGCTCGGGGCAGAACCT
CAGCCTTCCCGAGAGCACGCTGCTGCAGGCTGTCACCAACACTCAGGTCATTGATGGCTT
CTTTGTGAAGCGCACGGCGGACATTAAGGAGTCAGCTGCTTACCTGGCCCTCTTGACAAG
GGGCCTGCAGAGACTCTACCAGGGCCACACCCTCCGCAGTCGCCCCTGGGGACCCCCAGA
GGACCCTGTATCAAGGGCTGGGCCCCCCCCAAACCCTCTCTGCTCACTTCTCACCTTCAA
TGAGTTCAACACGGGAGCCATGAAGAACAAGGCCCAGTCTGTGCGGGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCACACGGTGCGGAAGCTACACGTTGGGGACTTCGTGTGGGTGGCACAGGAGACCAGTCC
CAGAGACCCCGCAAGACCCAGGGAACTAGTCCTGGACCACATCGTGGAGCGGAAAAGGCT
GGATGACCTGTGCCGCAGCATCATCGATGGCCGCTTCCGGGAGCAGAAGTTCCGGCTGAA
GCGCTGCGGCCTGGGGCACCCAGTATACCTGGTGGAGGAGCGTGGCTCGGGGCAGAACCT
CAGCCTTCCCGAGAGCACGCTGCTGCAGGCTGTCACCAACACTCAGGTCATTGATGGCTT
CTTTGTGAAGCGCACGGCGGACATTAAGGAGTCAGCTGCTTACCTGGCCCTCTTGACAAG
GGGCCTGCAGAGACTCTACCAGGGCCACACCCTCCGCAGTCGCCCCTGGGGACCCCCAGA
GGACCCTGTATCAAGGGCTGGGCCCCCCCCAAACCCTCTCTGCTCACTTCTCACCTTCAA
TGAGTTCAACACGGGAGCCATGAAGAACAAGGCCCAGTCTGTGCGGGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
168-288, gnl|bosTau2|chr29 (30482203-30482323) |
|
168-288, gnl|canFam2|chr18 (54424073-54423945) |
|
168-288, gnl|danRer3|chr15 (15697513-15697642) |
|
168-288, gnl|dasNov1|scaffold_96837 (2916-2813) |
|
168-288, gnl|echTel1|scaffold_91434 (964-837) |
|
168-288, gnl|fr1|chrUn (304782171-304782296) |
|
168-288, gnl|hg17|chr11 (65388538-65388666) |
|
168-288, gnl|Hg17|chr11 (65388542-65388662) |
|
168-288, gnl|mm7|chr19 (5379043-5378915) |
|
168-288, gnl|Mm7|chr19 (5379037-5378917) |
|
168-288, gnl|monDom2|scaffold_107 (3016887-3016764) |
|
168-288, gnl|oryCun1|scaffold_84679 (1405-1532) |
|
168-288, gnl|panTro1|chr9 (66634917-66635045) |
|
168-288, gnl|rheMac2|chr14 (8590100-8589972) |
|
168-288, gnl|rn3|chr1 (208281527-208281399) |
|
168-288, gnl|tetNig1|chrUn_random (12876156-12876027) |
|
168-288, gnl|xenTro1|scaffold_521 (647420-647544) |
| |
|
380-524, gnl|bosTau2|chr29 (30482696-30482840) |
|
380-524, gnl|Hg17|chr11 (65389061-65389205) |
|
380-524, gnl|Mm7|chr19 (5378572-5378428) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
168-288, gnl|bosTau2|chr29 (30482203-30482323) |
|
168-288, gnl|canFam2|chr18 (54424073-54423945) |
|
168-288, gnl|danRer3|chr15 (15697513-15697642) |
|
168-288, gnl|dasNov1|scaffold_96837 (2916-2813) |
|
168-288, gnl|echTel1|scaffold_91434 (964-837) |
|
168-288, gnl|fr1|chrUn (304782171-304782296) |
|
168-288, gnl|hg17|chr11 (65388538-65388666) |
|
168-288, gnl|Hg17|chr11 (65388542-65388662) |
|
168-288, gnl|mm7|chr19 (5379043-5378915) |
|
168-288, gnl|Mm7|chr19 (5379037-5378917) |
|
168-288, gnl|monDom2|scaffold_107 (3016887-3016764) |
|
168-288, gnl|oryCun1|scaffold_84679 (1405-1532) |
|
168-288, gnl|panTro1|chr9 (66634917-66635045) |
|
168-288, gnl|rheMac2|chr14 (8590100-8589972) |
|
168-288, gnl|rn3|chr1 (208281527-208281399) |
|
168-288, gnl|tetNig1|chrUn_random (12876156-12876027) |
|
168-288, gnl|xenTro1|scaffold_521 (647420-647544) |
| |
|
380-524, gnl|bosTau2|chr29 (30482696-30482840) |
|
380-524, gnl|Hg17|chr11 (65389061-65389205) |
|
380-524, gnl|Mm7|chr19 (5378572-5378428) |
|
fty (0.351679) |
|
eru (0.120048) |
|
jej (0.0989218) |
|
fty (0.351679) |
|
eru (0.120048) |
|
jej (0.0989218) |
