Ss1.1-rfty524b_j20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGCCCACACGGAGGAATACGAGAGAAGGAACCAGGACTACAAGGACATTTGTTCCCGAA TGCAGTTTTGTCAGGTGGACCCAAGCCTCCCCCCTCTCACCATCAACAAGCACGATGTGA TCTTGTGGCTGGGGGACCTCAACTACAGGATAGAAGAGCTGGATGTGGAAAAAGTGAAAA AGCTCATCGAAGAGAAGGCCTTTCAAACCCTGTATGCGTATGACCAGCTGAGAGCTCAGG TGGCTGCAAAGGCTGTCTTTGAAGGCTTCAGCGAGGGTGAGCTCACGTTCCAGCCCACCT ATAAGTATGATACTGGCTCCGATGACTGGGATACCAGTGAGAAGTGTCGCGCTCCTGCCT GGTGTGACCGGGTCCTCTGGAAAGGGAAGAACATCACTCAGCTGAGCTACCAGAGCCACA TGGCCCTGAAGACCAGTGACCACAAGCCCGTCAGCTCAGTGTTCGACATCGGGGTGAGAG TCGTAAATGAAGAGCTTTATCGGAAGACTCTGGAGGAGATTGTTCGCTCCCTGGATAAGC TGGAAAATGCCAACATCCCTTCTGTGTCCCTGTCCAGGCGAGAGTTCTGTTTTCAGAACG TGAAGTTCATGCAACTCCAAGTAGAATCCTTTACCATTCAGAATGGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGCCCACACGGAGGAATACGAGAGAAGGAACCAGGACTACAAGGACATTTGTTCCCGAA TGCAGTTTTGTCAGGTGGACCCAAGCCTCCCCCCTCTCACCATCAACAAGCACGATGTGA TCTTGTGGCTGGGGGACCTCAACTACAGGATAGAAGAGCTGGATGTGGAAAAAGTGAAAA AGCTCATCGAAGAGAAGGCCTTTCAAACCCTGTATGCGTATGACCAGCTGAGAGCTCAGG TGGCTGCAAAGGCTGTCTTTGAAGGCTTCAGCGAGGGTGAGCTCACGTTCCAGCCCACCT ATAAGTATGATACTGGCTCCGATGACTGGGATACCAGTGAGAAGTGTCGCGCTCCTGCCT GGTGTGACCGGGTCCTCTGGAAAGGGAAGAACATCACTCAGCTGAGCTACCAGAGCCACA TGGCCCTGAAGACCAGTGACCACAAGCCCGTCAGCTCAGTGTTCGACATCGGGGTGAGAG TCGTAAATGAAGAGCTTTATCGGAAGACTCTGGAGGAGATTGTTCGCTCCCTGGATAAGC TGGAAAATGCCAACATCCCTTCTGTGTCCCTGTCCAGGCGAGAGTTCTGTTTTCAGAACG TGAAGTTCATGCAACTCCAAGTAGAATCCTTTACCATTCAGAATGGAC |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 116-227, gnl|bosTau2|chr3 (75227994-75228105) | |
| 116-227, gnl|canFam2|chr15 (7669854-7669660) | |
| 116-227, gnl|danRer3|chr14 (56169661-56169511) | |
| 116-227, gnl|dasNov1|scaffold_6211 (39095-39292) | |
| 116-227, gnl|fr1|chrUn (286290289-286290090) | |
| 116-227, gnl|galGal2|chr23 (3098439-3098292) | |
| 116-227, gnl|hg17|chr1 (38017546-38017743) | |
| 116-227, gnl|Hg17|chr1 (38017683-38017572) | |
| 116-227, gnl|loxAfr1|scaffold_6249 (46299-46478) | |
| 116-227, gnl|mm7|chr4 (124231292-124231107) | |
| 116-227, gnl|Mm7|chr4 (124231165-124231276) | |
| 116-227, gnl|monDom2|scaffold_43 (11621091-11620907) | |
| 116-227, gnl|oryCun1|scaffold_181366 (141594-141403) | |
| 116-227, gnl|panTro1|chr1 (38866535-38866732) | |
| 116-227, gnl|rheMac2|chr1 (40756110-40756307) | |
| 116-227, gnl|rn3|chr5 (144127018-144126834) | |
| 116-227, gnl|tetNig1|chr1 (4192962-4193098) | |
| 116-227, gnl|xenTro1|scaffold_864 (447973-448098) | |
| 335-475, gnl|bosTau2|chr3 (75231504-75231644) | |
| 335-475, gnl|canFam2|chr15 (7673091-7672932) | |
| 335-475, gnl|danRer3|chr14 (56173587-56173431) | |
| 335-475, gnl|dasNov1|scaffold_55648 (8885-8744) | |
| 335-475, gnl|echTel1|scaffold_278717 (41637-41497) | |
| 335-475, gnl|fr1|chrUn (286290901-286290743) | |
| 335-475, gnl|galGal2|chr23 (3099008-3098864) | |
| 335-475, gnl|hg17|chr1 (38012951-38013110) | |
| 335-475, gnl|Hg17|chr1 (38013091-38012951) | |
| 335-475, gnl|loxAfr1|scaffold_6249 (43308-43467) | |
| 335-475, gnl|mm7|chr4 (124233855-124233696) | |
| 335-475, gnl|Mm7|chr4 (124233713-124233853) | |
| 335-475, gnl|monDom2|scaffold_43 (11625648-11625497) | |
| 335-475, gnl|oryCun1|scaffold_181366 (147763-147604) | |
| 335-475, gnl|panTro1|chr1 (38861932-38862091) | |
| 335-475, gnl|rheMac2|chr1 (40750999-40751158) | |
| 335-475, gnl|rn3|chr5 (144130184-144130025) | |
| 335-475, gnl|tetNig1|chr1 (4192092-4192233) | |
| 335-475, gnl|xenTro1|scaffold_864 (442989-443130) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 116-227, gnl|bosTau2|chr3 (75227994-75228105) | |
| 116-227, gnl|canFam2|chr15 (7669854-7669660) | |
| 116-227, gnl|danRer3|chr14 (56169661-56169511) | |
| 116-227, gnl|dasNov1|scaffold_6211 (39095-39292) | |
| 116-227, gnl|fr1|chrUn (286290289-286290090) | |
| 116-227, gnl|galGal2|chr23 (3098439-3098292) | |
| 116-227, gnl|hg17|chr1 (38017546-38017743) | |
| 116-227, gnl|Hg17|chr1 (38017683-38017572) | |
| 116-227, gnl|loxAfr1|scaffold_6249 (46299-46478) | |
| 116-227, gnl|mm7|chr4 (124231292-124231107) | |
| 116-227, gnl|Mm7|chr4 (124231165-124231276) | |
| 116-227, gnl|monDom2|scaffold_43 (11621091-11620907) | |
| 116-227, gnl|oryCun1|scaffold_181366 (141594-141403) | |
| 116-227, gnl|panTro1|chr1 (38866535-38866732) | |
| 116-227, gnl|rheMac2|chr1 (40756110-40756307) | |
| 116-227, gnl|rn3|chr5 (144127018-144126834) | |
| 116-227, gnl|tetNig1|chr1 (4192962-4193098) | |
| 116-227, gnl|xenTro1|scaffold_864 (447973-448098) | |
| 335-475, gnl|bosTau2|chr3 (75231504-75231644) | |
| 335-475, gnl|canFam2|chr15 (7673091-7672932) | |
| 335-475, gnl|danRer3|chr14 (56173587-56173431) | |
| 335-475, gnl|dasNov1|scaffold_55648 (8885-8744) | |
| 335-475, gnl|echTel1|scaffold_278717 (41637-41497) | |
| 335-475, gnl|fr1|chrUn (286290901-286290743) | |
| 335-475, gnl|galGal2|chr23 (3099008-3098864) | |
| 335-475, gnl|hg17|chr1 (38012951-38013110) | |
| 335-475, gnl|Hg17|chr1 (38013091-38012951) | |
| 335-475, gnl|loxAfr1|scaffold_6249 (43308-43467) | |
| 335-475, gnl|mm7|chr4 (124233855-124233696) | |
| 335-475, gnl|Mm7|chr4 (124233713-124233853) | |
| 335-475, gnl|monDom2|scaffold_43 (11625648-11625497) | |
| 335-475, gnl|oryCun1|scaffold_181366 (147763-147604) | |
| 335-475, gnl|panTro1|chr1 (38861932-38862091) | |
| 335-475, gnl|rheMac2|chr1 (40750999-40751158) | |
| 335-475, gnl|rn3|chr5 (144130184-144130025) | |
| 335-475, gnl|tetNig1|chr1 (4192092-4192233) | |
| 335-475, gnl|xenTro1|scaffold_864 (442989-443130) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fty (0.17584) | |
| cki (0.165235) | |
| csp (0.161186) | |
| cly (0.120642) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| cki (0.165235) | |
| csp (0.161186) | |
| cly (0.120642) |