Non-Coding RNA Search

Ss1.1-rfty537b_e21.5

Sequence:


               
               TCTTTGTTTAACAATGGAGAGTATGTTATCTGCACTTTCCTCCAGTTTGACGTGTCCTGC
GCTGCCAGCCGGGGCGGCCCCACCGCAGTTCAGAGCCTGGTCACTTTTCTTCTTTTTGTA
CTTGTCCTTGTACATCTTGTTGCGGTGCTTCTTGCACATCCAGGGCTTGCGCTGCTTGGC
CACCTGGCTTGTGGTCTCACTGCAGCCCTCATAGGTGCAGGTCTTGCTCATGCTGGTCCC
GCCGCTGCCCCGTCTCCGGGCTCCCCCGCTGCCGCCCTCGCCCCCCGAGTGTGTCTCCTC
GTCTTCCAGATCCTCCAAGCTAGCCGTGCTCTCGCCTCCCCCTGGGGGGTCCGAAGTGTC
CAGCAGGTCGGTTTCGTCCTCCCCCGCCTCGTCCTCGCCATCCCCCGCCACTTCACACAG
GTAGCCAACAGGCTTGCCCGTCCCGGCGCTGCCCCCCAGTGCCGGAGCCTGCCTCAGGAC
GCCCTCTGCCGCAGCCTCGTCCTGCCCTCCACAGGGGCGCATCACCAGCAGGGTGAACTG
AGAGGCCGCAGCCGGGACCGGGGCGGCAGCCAGGGCCTGGCCGGGGGCAGAGGCTGGGGC
CCCGGGGCGGAGCGCGCCGCTGGCGGCGCCCGGCCCCGCGCCCTCGGCGACAGCCTGCAC
CTCCGTGCTGCTGAGACCTGGTGGGGGTCCACGACCCCAGCCTTTCTGCACCTGCTGGGC
CCAACTGCACTGAGCAAACCACCGACCCCGGCCCGCCGAGGGGAAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTTGTTTAACAATGGAGAGTATGTTATCTGCACTTTCCTCCAGTTTGACGTGTCCTGC
GCTGCCAGCCGGGGCGGCCCCACCGCAGTTCAGAGCCTGGTCACTTTTCTTCTTTTTGTA
CTTGTCCTTGTACATCTTGTTGCGGTGCTTCTTGCACATCCAGGGCTTGCGCTGCTTGGC
CACCTGGCTTGTGGTCTCACTGCAGCCCTCATAGGTGCAGGTCTTGCTCATGCTGGTCCC
GCCGCTGCCCCGTCTCCGGGCTCCCCCGCTGCCGCCCTCGCCCCCCGAGTGTGTCTCCTC
GTCTTCCAGATCCTCCAAGCTAGCCGTGCTCTCGCCTCCCCCTGGGGGGTCCGAAGTGTC
CAGCAGGTCGGTTTCGTCCTCCCCCGCCTCGTCCTCGCCATCCCCCGCCACTTCACACAG
GTAGCCAACAGGCTTGCCCGTCCCGGCGCTGCCCCCCAGTGCCGGAGCCTGCCTCAGGAC
GCCCTCTGCCGCAGCCTCGTCCTGCCCTCCACAGGGGCGCATCACCAGCAGGGTGAACTG
AGAGGCCGCAGCCGGGACCGGGGCGGCAGCCAGGGCCTGGCCGGGGGCAGAGGCTGGGGC
CCCGGGGCGGAGCGCGCCGCTGGCGGCGCCCGGCCCCGCGCCCTCGGCGACAGCCTGCAC
CTCCGTGCTGCTGAGACCTGGTGGGGGTCCACGACCCCAGCCTTTCTGCACCTGCTGGGC
CCAACTGCACTGAGCAAACCACCGACCCCGGCCCGCCGAGGGGAAGAG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q8TC40_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8TC40_HUMAN

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               39-722, gnl|bosTau2|chr11 (79701092-79701795)
               

               
               39-722, gnl|Hg17|chr13 (36292095-36291447)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               39-722, gnl|bosTau2|chr11 (79701092-79701795)
               

               
               39-722, gnl|Hg17|chr13 (36292095-36291447)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fty (0.17584)
               

               
               eep (0.122564)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               eep (0.122564)
               

               
               eje (0.0988338)

	39-722, gnl\|bosTau2\|chr11 (79701092-79701795)
	39-722, gnl\|Hg17\|chr13 (36292095-36291447)