Ss1.1-rfty538b_e19.5
|
TCTCGGGCCGTACCTGGGGATTCGGGAGGAATCCGTGGTAATCCACGGCCAAGTAGCACC
TGGGAATCCTGGTTAGCAGGTTGCGGTTCCAGCCTCGCTCTCCGCGCCTCGTCGCCATGC
CTCGCAAAATTGAGGAAATCAAGGACTTTCTGCTGACGGCCAGACGAAAGGACGCCAAAT
CTGTCAAGATCAAGAAAAATAAGGATAATGTGAAGTTCAAAGTTCGATGCAGCAGATACC
TGTACACCTTGGTCATCACAGACAAAGAGAAGGCAGAGAAGCTGAAGCAGTCCCTGCCCC
CAGGTCTGGCCGTGAAGGAGCTGAAGTGAACCACGCATGCTGATTGGAACTGTATTAAAA
TTTTTAAAATTCAAAAAAAAAAAAAAAAAAAAAAAAATGGGGAAGAAAATGGTATCTGGG
AGTGGCTTCTGGTGGGAACGGGATGGGGCCCTGGTTGCCTCAAAATCCTGGGCTGTGATC
CCAGTAGACAAATAAAGCCATCTCTCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCTCGGGCCGTACCTGGGGATTCGGGAGGAATCCGTGGTAATCCACGGCCAAGTAGCACC
TGGGAATCCTGGTTAGCAGGTTGCGGTTCCAGCCTCGCTCTCCGCGCCTCGTCGCCATGC
CTCGCAAAATTGAGGAAATCAAGGACTTTCTGCTGACGGCCAGACGAAAGGACGCCAAAT
CTGTCAAGATCAAGAAAAATAAGGATAATGTGAAGTTCAAAGTTCGATGCAGCAGATACC
TGTACACCTTGGTCATCACAGACAAAGAGAAGGCAGAGAAGCTGAAGCAGTCCCTGCCCC
CAGGTCTGGCCGTGAAGGAGCTGAAGTGAACCACGCATGCTGATTGGAACTGTATTAAAA
TTTTTAAAATTCAAAAAAAAAAAAAAAAAAAAAAAAATGGGGAAGAAAATGGTATCTGGG
AGTGGCTTCTGGTGGGAACGGGATGGGGCCCTGGTTGCCTCAAAATCCTGGGCTGTGATC
CCAGTAGACAAATAAAGCCATCTCTCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
amn (4.59482) |
|
fty (2.81343) |
|
lnt (2.56155) |
|
nje (2.4888) |
|
eje (2.37201) |
|
elu (1.92678) |
|
nca (1.91623) |
|
fce (1.90114) |
|
nep (1.65532) |
|
mcp (1.53584) |
|
eye (1.53453) |
|
nlu (1.53345) |
|
cag (1.51194) |
|
med (1.51128) |
|
ecc (1.38042) |
|
csp (1.28949) |
|
ill (1.22915) |
|
eep (1.22564) |
|
pty (1.14172) |
|
cga (1.11638) |
|
eru (1.08043) |
|
fli (1.0144) |
|
nbm (0.993246) |
|
ece (0.917221) |
|
nms (0.855432) |
|
nco (0.808669) |
|
nmm (0.796813) |
|
fcc (0.791139) |
|
col (0.780031) |
|
hyp (0.714184) |
|
fbs (0.701385) |
|
cst (0.700182) |
|
jca (0.683761) |
|
cut (0.679694) |
|
ese (0.632511) |
|
ton (0.526501) |
|
cki (0.495704) |
|
eli (0.455443) |
|
hlv (0.417769) |
|
ute (0.398353) |
|
cov (0.396458) |
|
jej (0.395687) |
|
ebs (0.354904) |
|
fhi (0.339155) |
|
vin (0.332557) |
|
cly (0.241284) |
|
mgp (0.230681) |
|
mas (0.210305) |
|
cty (0.20816) |
|
aor (0.195274) |
|
sto (0.179824) |
|
cje (0.165235) |
|
cli (0.152812) |
|
fat (0.147427) |
|
liv (0.146284) |
|
spl (0.143184) |
|
che (0.136314) |
|
thg (0.126791) |
|
amn (4.59482) |
|
fty (2.81343) |
|
lnt (2.56155) |
|
nje (2.4888) |
|
eje (2.37201) |
|
elu (1.92678) |
|
nca (1.91623) |
|
fce (1.90114) |
|
nep (1.65532) |
|
mcp (1.53584) |
|
eye (1.53453) |
|
nlu (1.53345) |
|
cag (1.51194) |
|
med (1.51128) |
|
ecc (1.38042) |
|
csp (1.28949) |
|
ill (1.22915) |
|
eep (1.22564) |
|
pty (1.14172) |
|
cga (1.11638) |
|
eru (1.08043) |
|
fli (1.0144) |
|
nbm (0.993246) |
|
ece (0.917221) |
|
nms (0.855432) |
|
nco (0.808669) |
|
nmm (0.796813) |
|
fcc (0.791139) |
|
col (0.780031) |
|
hyp (0.714184) |
|
fbs (0.701385) |
|
cst (0.700182) |
|
jca (0.683761) |
|
cut (0.679694) |
|
ese (0.632511) |
|
ton (0.526501) |
|
cki (0.495704) |
|
eli (0.455443) |
|
hlv (0.417769) |
|
ute (0.398353) |
|
cov (0.396458) |
|
jej (0.395687) |
|
ebs (0.354904) |
|
fhi (0.339155) |
|
vin (0.332557) |
|
cly (0.241284) |
|
mgp (0.230681) |
|
mas (0.210305) |
|
cty (0.20816) |
|
aor (0.195274) |
|
sto (0.179824) |
|
cje (0.165235) |
|
cli (0.152812) |
|
fat (0.147427) |
|
liv (0.146284) |
|
spl (0.143184) |
|
che (0.136314) |
|
thg (0.126791) |